RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ZNF559Q9BR84 538 aa13.61□□□□□ -0.23
RAB40B-202ENST00000538809 EQTNQ9NQ60 294 aa13.61□□□□□ -0.23
RAB40B-202ENST00000538809 FLRT3Q9NZU0 649 aa13.61□□□□□ -0.23
RAB40B-202ENST00000538809 GIMAP2Q9UG22 337 aa13.61□□□□□ -0.23
RAB40B-202ENST00000538809 ZDHHC2Q9UIJ5 367 aa13.61□□□□□ -0.23
RAB40B-202ENST00000538809 DKKL1Q9UK85 242 aa13.61□□□□□ -0.23
RAB40B-202ENST00000538809 ITGB1BP2Q9UKP3 347 aa13.61□□□□□ -0.23
RAB40B-202ENST00000538809 TEP1Q99973 2627 aaKnown RBP13.6□□□□□ -0.23
RAB40B-202ENST00000538809 RGS16O15492 202 aaPredicted RBP13.6□□□□□ -0.23
RAB40B-202ENST00000538809 CTIFO43310 598 aaKnown RBP13.6□□□□□ -0.23
RAB40B-202ENST00000538809 CBR3O75828 277 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 TUBBP07437 444 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 CEACAM8P31997 349 aaPredicted RBP13.6□□□□□ -0.23
RAB40B-202ENST00000538809 EVI2BP34910 448 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 GCKP35557 465 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 RFX3P48380 749 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 SERPINB4P48594 390 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 AGFG1P52594 562 aaKnown RBP13.6□□□□□ -0.23
RAB40B-202ENST00000538809 ZNF136P52737 540 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 PNLIPRP2P54317 469 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 GAS1P54826 345 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 PSPHP78330 225 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 SRYQ05066 204 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 STX5Q13190 355 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 NSUN5P2Q63ZY6 315 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 PLXDC2Q6UX71 529 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 IFNEQ86WN2 208 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 HOXB13Q92826 284 aaPredicted RBP13.6□□□□□ -0.23
RAB40B-202ENST00000538809 ELP4Q96EB1 424 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 C3orf30Q96M34 536 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 TUBA1CQ9BQE3 449 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 REEP4Q9H6H4 257 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 TAS2R10Q9NYW0 307 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 BAIAP2L1Q9UHR4 511 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 CBLCQ9ULV8 474 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 SPG11Q96JI7 2443 aa13.6□□□□□ -0.23
RAB40B-202ENST00000538809 F8P00451 2351 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 MED13LQ71F56 2210 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 H0Y3Z8 333 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 DVL2O14641 736 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 ACTL6AO96019 429 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 IL2RAP01589 272 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 BCKDHAP12694 445 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 EFNA1P20827 205 aaPredicted RBP13.59□□□□□ -0.23
RAB40B-202ENST00000538809 SRD5A2P31213 254 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 UQCRC1P31930 480 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 GPC1P35052 558 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 TIMP3P35625 211 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 MAP3K8P41279 467 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 STARP49675 285 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 MPP2Q14168 576 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 RCAN2Q14206 197 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 SZRD1Q7Z422 152 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 CDH24Q86UP0 819 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 TMEM200AQ86VY9 491 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 TRIM42Q8IWZ5 723 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 C9orf106Q8NAJ2 232 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 OR4K17Q8NGC6 315 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 FBXO30Q8TB52 745 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 PPCDCQ96CD2 204 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 LMF2Q9BU23 707 aaKnown RBP13.59□□□□□ -0.23
RAB40B-202ENST00000538809 Q9N2J8 555 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 NTMQ9P121 344 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 PPP4R1LQ9P1A2 415 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 KCNN3Q9UGI6 736 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 RPH3AQ9Y2J0 694 aaPredicted RBP13.59□□□□□ -0.23
RAB40B-202ENST00000538809 ACTL7BQ9Y614 415 aa13.59□□□□□ -0.23
RAB40B-202ENST00000538809 CELSR1Q9NYQ6 3014 aa13.58□□□□□ -0.23
RAB40B-202ENST00000538809 GXYLT2A0PJZ3 443 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 MBD3L4A6NDZ8 208 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 MBD3L3A6NE82 208 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 MBD3L5A6NJ08 208 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 CD8B2A6NJW9 211 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 TM9SF1O15321 606 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 BIRC5O15392 142 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 ITM2AO43736 263 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 SKAP2O75563 359 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 LYPLA1O75608 230 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 DPP4P27487 766 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 ASMTP46597 345 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 ASCL1P50553 236 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 GFRA1P56159 465 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 MRPS22P82650 360 aaKnown RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 GAB1Q13480 694 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 ZNHIT3Q15649 155 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 DECR1Q16698 335 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 C6orf136Q5SQH8 315 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 CEP85LQ5SZL2 805 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 POMZP3Q6PJE2 187 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 ARSKQ6UWY0 536 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 NUDCD3Q8IVD9 361 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 ZZZ3Q8IYH5 903 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 MBD3L2Q8NHZ7 208 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 PIK3R3Q92569 461 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 MTERF3Q96E29 417 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 PGM2Q96G03 612 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 PPP3R2Q96LZ3 170 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 SFXN2Q96NB2 322 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms