RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ZER1Q7Z7L7 766 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SYT12Q8IV01 421 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SAMD14Q8IZD0 417 aaPredicted RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 CPXM2Q8N436 756 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 TOMM5Q8N4H5 51 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 DNAJC5GQ8N7S2 189 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SIDT2Q8NBJ9 832 aaKnown RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 ZNF485Q8NCK3 441 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 OR4K2Q8NGD2 314 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 OR2T35Q8NGX2 323 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 OR6S1Q8NH40 331 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 NEIL3Q8TAT5 605 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ELP5Q8TE02 316 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ZNF296Q8WUU4 475 aaPredicted RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 NSMAFQ92636 917 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 FGF11Q92914 225 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ELP4Q96EB1 424 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 TCEAL4Q96EI5 215 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PHYHIPLQ96FC7 376 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 HMCESQ96FZ2 354 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PPP1R16AQ96I34 528 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 NECTIN4Q96NY8 510 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 HBEGFQ99075 208 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SLC38A3Q99624 504 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 DPH7Q9BTV6 452 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 MRI1Q9BV20 369 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 POLR2J3Q9H1A7 115 aaKnown RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 MAGEH1Q9H213 219 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ABHD16BQ9H3Z7 469 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PLEKHA1Q9HB21 404 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 MCCC2Q9HCC0 563 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ADARB2Q9NS39 739 aaKnown RBP6.3□□□□□ -1.4
USP28-207ENST00000538475 NUDT15Q9NV35 164 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 TMLHEQ9NVH6 421 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 RLIMQ9NVW2 624 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 TAS2R16Q9NYV7 291 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 CTSFQ9UBX1 484 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 MLXQ9UH92 298 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 CLEC2DQ9UHP7 191 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ZMYM5Q9UJ78 669 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ACSL6Q9UKU0 697 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ACAD8Q9UKU7 415 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PLCL2Q9UPR0 1127 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 CAMK2AQ9UQM7 478 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 CA5BQ9Y2D0 317 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 DLGAP4Q9Y2H0 992 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 KCTD3Q9Y597 815 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 PCDHB7Q9Y5E2 793 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 SNX10Q9Y5X0 201 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 HS3ST4Q9Y661 456 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ARL5AQ9Y689 179 aa6.3□□□□□ -1.4
USP28-207ENST00000538475 ANAPC1Q9H1A4 1944 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 LRRC72A6NJI9 287 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 AGAP14A8MT82 685 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 HEPACAM2A8MVW5 462 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 KDM4EB2RXH2 506 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 HNRNPCL2B2RXH8 293 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 MCRIP1C9JLW8 97 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 LRRN3E7EW58 273 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SULT1C2O00338 296 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SSNA1O43805 119 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 OR1I1O60431 355 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 GALR3O60755 368 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 RAMP2O60895 175 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 STX11O75558 287 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 GCM2O75603 506 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 HPP00738 406 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 CFDP00746 253 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 GASTP01350 101 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 LGALS2P05162 132 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 GJB1P08034 283 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 ADRA2AP08913 450 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 CLEC2LP0C7M8 214 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 UBBP0CG47 229 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 UBCP0CG48 685 aaKnown RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 MPC1LP0DKB6 136 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 FOLR2P14207 255 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 GABRA1P14867 456 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 JUPP14923 745 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SPI1P17947 270 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 ELK1P19419 428 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 MC4RP32245 332 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 IFNGR2P38484 337 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 RFC3P40938 356 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 MNDAP41218 407 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 AVPR1BP47901 424 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SMSP52788 366 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 TTC3P53804 2025 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 GAS1P54826 345 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 RPS27AP62979 156 aaKnown RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 UBA52P62987 128 aaKnown RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 CDK5Q00535 292 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 FABP5Q01469 135 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 EEF1A2Q05639 463 aaKnown RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 SLC14A1Q13336 389 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 NFATC2Q13469 925 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 CDH18Q13634 790 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SCARB2Q14108 478 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 PTPRCAPQ14761 206 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms