RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 SERHL2Q9H4I8 314 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 RUBCNLQ9H714 662 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 LIN28AQ9H9Z2 209 aaKnown RBP9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ATP13A2Q9NQ11 1180 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 POLE3Q9NRF9 147 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ABI3Q9P2A4 366 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 IL17BQ9UHF5 180 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 MKLN1Q9UL63 735 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 IFT52Q9Y366 437 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 FAM32AQ9Y421 112 aaKnown RBP9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CLDN16Q9Y5I7 305 aa9.88□□□□□ -0.83
TNFRSF1A-211ENST00000538363 FER1L5A0AVI2 2057 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 KNTC1P50748 2209 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SDK2Q58EX2 2172 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 FRG2CA6NGY1 282 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ZNF891A8MT65 544 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 H3BNH8 94 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 GTPBP1O00178 669 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SCDO00767 359 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SOCS6O14544 535 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ACOT8O14734 319 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ACOX3O15254 700 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 KLK10O43240 276 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CYP7B1O75881 506 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PRKD3O94806 890 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 KCNK2O95069 426 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PSMG1O95456 288 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 OPN1SWP03999 348 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 GPIP06744 558 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PRKAR1AP10644 381 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 COX6A1P12074 109 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ATP6V1B2P21281 511 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 F8A1P23610 371 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ITGA3P26006 1051 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 IFNA8P32881 189 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TMED10P49755 219 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 RPP38P78345 283 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 RHDQ02161 417 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CHRNEQ04844 493 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PCOLCEQ15113 449 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ADRM1Q16186 407 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 GLIPR1L2Q4G1C9 344 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 BROXQ5VW32 411 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PRAMEF8Q5VWM4 474 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PRAMEF7Q5VXH5 474 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PLAG1Q6DJT9 500 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SLC34A3Q8N130 599 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ZNF619Q8N2I2 560 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 C10orf111Q8N326 155 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TMEM156Q8N614 296 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SLC5A8Q8N695 610 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 BCORP1Q8N888 145 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SMYD1Q8NB12 490 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CLEC1AQ8NC01 280 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ZNF248Q8NDW4 579 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 OR5M3Q8NGP4 307 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 OR52P1PQ8NH57 321 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PYDC1Q8WXC3 89 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TMBIM1Q969X1 311 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TP53INP1Q96A56 240 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PYURFQ96I23 114 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 THOC3Q96J01 351 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 VSTM2LQ96N03 204 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SDF2Q99470 211 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TREX2Q9BQ50 279 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 NXF5Q9H1B4 397 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 DCAF13Q9NV06 445 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TEKT2Q9UIF3 430 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 GPR55Q9Y2T6 319 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 NEUROG3Q9Y4Z2 214 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 AP4S1Q9Y587 144 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PCDHGA6Q9Y5G7 932 aa9.87□□□□□ -0.83
TNFRSF1A-211ENST00000538363 RRP8O43159 456 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PRKNO60260 465 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TPST1O60507 370 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 IGKV3-11P04433 115 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 DBIP07108 87 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CHRM4P08173 479 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 FCGR1AP12314 374 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ETS2P15036 469 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 HOXB6P17509 224 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PIGAP37287 484 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CASRP41180 1078 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 MAN2A2P49641 1150 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 GPR143P51810 404 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 EFNA3P52797 238 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PSG6Q00889 435 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 DUSP8Q13202 625 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ATP1A4Q13733 1029 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CCNIQ14094 377 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 EFR3AQ14156 821 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 EBPQ15125 230 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 IFI44LQ53G44 452 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 EIPR1Q53HC9 387 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 AAGABQ6PD74 315 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 LRRC69Q6ZNQ3 347 aa9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 EIF3MQ7L2H7 374 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-211ENST00000538363 OLIG3Q7RTU3 272 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms