RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 HOXC5Q00444 222 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 BNIP3Q12983 259 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SLC18B1Q6NT16 456 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 PLBD1Q6P4A8 553 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 C6orf15Q6UXA7 325 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 SHFQ7M4L6 423 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 VRK3Q8IV63 474 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 LAS2Q8IYD9 372 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 IQCF1Q8N6M8 205 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 NETO1Q8TDF5 533 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ASB11Q8WXH4 323 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 HOXB13Q92826 284 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 BORCS5Q969J3 196 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 FOXN4Q96NZ1 517 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MFRPQ9BY79 579 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 STOML2Q9UJZ1 356 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MGAT4AQ9UM21 535 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MEMO1Q9Y316 297 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 AKAP11Q9UKA4 1901 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 F5H5K5 113 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 H3BNX3 289 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 FESP07332 822 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SLC2A2P11168 524 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 MYF5P13349 255 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 CPMP14384 443 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 RHDQ02161 417 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 GALNT1Q10472 559 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 SEC23BQ15437 767 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 GLT8D1Q68CQ7 371 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ABHD12BQ7Z5M8 362 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 DTX3Q8N9I9 347 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 KDM1BQ8NB78 822 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SLC7A6OSQ96CW6 309 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 SAMD8Q96LT4 415 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ZNF317Q96PQ6 595 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 OR7D2Q96RA2 312 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 USB1Q9BQ65 265 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 ENKD1Q9H0I2 346 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 FGF21Q9NSA1 209 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 TEX13DA0A0J9YY54 714 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 ARGFXA6NJG6 315 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 GABRR3A8MPY1 467 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SRPX2O60687 465 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 PRKRAO75569 313 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 RAD51DO75771 328 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 AIFM1O95831 613 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 PRH1P02810 166 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 HIST1H1TP22492 207 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 EIF2DP41214 584 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 MECP2P51608 486 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 PRDX1Q06830 199 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 DNASE1L3Q13609 305 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MLC1Q15049 377 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 TAZQ16635 292 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 KIAA0907Q7Z7F0 614 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 TMED4Q7Z7H5 227 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 AKAP14Q86UN6 197 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ESX1Q8N693 406 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SPERTQ8NA61 448 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 OR9K2Q8NGE7 335 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 OR51L1Q8NGJ5 315 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SECISBP2Q96T21 854 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 CDX2Q99626 313 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 FAM117AQ9C073 453 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 CDCP1Q9H5V8 836 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 TRPV4Q9HBA0 871 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 CD320Q9NPF0 282 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 KCND3Q9UK17 655 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MYO5AQ9Y4I1 1855 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 CD8B2A6NJW9 211 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 AHCYL1O43865 530 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 HRGP04196 525 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MAS1P04201 325 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 CD8BP10966 210 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 DAP3P51398 398 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 SPEM2Q0P670 501 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ATP6AP1Q15904 470 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 OPN5Q6U736 354 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 ETFBKMTQ8IXQ9 262 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 FTMTQ8N4E7 242 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 LILRA3Q8N6C8 439 aaPredicted RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 TEX19Q8NA77 164 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 OR14A16Q8NHC5 309 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 NPRL2Q8WTW4 380 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 OR1E3Q8WZA6 343 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 THOC3Q96J01 351 aaKnown RBP5.05□□□□□ -1.6
LRP6-203ENST00000538239 CNIH4Q9P003 139 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 PADI1Q9ULC6 663 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 SPEF1Q9Y4P9 236 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 MYO9BQ13459 2157 aa5.05□□□□□ -1.6
LRP6-203ENST00000538239 BLACEA4D250 179 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ANTXRLA6NF34 631 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 EEF1E1-BLOC1S5C9J1V9 151 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 RNASET2O00584 256 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 HMGB3O15347 200 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 EEF1E1O43324 174 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 RAD1O60671 282 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MTRF1O75570 445 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 HLA-DPB1P04440 258 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 HMGN2P05204 90 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms