RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 GRAMD2AQ8IUY3 354 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 CSNK1G2-AS1Q8NCQ2 148 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 GMCL1P1Q8NEA9 526 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 C17orf47Q8NEP4 570 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 IPMKQ8NFU5 416 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 FLVCR1-AS1Q8TAF5 88 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 ITLN1Q8WWA0 313 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 TOMM40LQ969M1 308 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 TRIM44Q96DX7 344 aaPredicted RBP4.3□□□□□ -1.72
PRKDC-208ENST00000536710 C11orf24Q96F05 449 aaPredicted RBP4.3□□□□□ -1.72
PRKDC-208ENST00000536710 AKR1E2Q96JD6 320 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 C4orf36Q96KX1 117 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 TESK2Q96S53 571 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 RBM28Q9NW13 759 aaKnown RBP4.3□□□□□ -1.72
PRKDC-208ENST00000536710 PAK5Q9P286 719 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 PRODH2Q9UF12 536 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 KLK13Q9UKR3 277 aa4.3□□□□□ -1.72
PRKDC-208ENST00000536710 BARX2Q9UMQ3 279 aaPredicted RBP4.3□□□□□ -1.72
PRKDC-208ENST00000536710 IGHV3OR16-12A0A075B7B8 117 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 FAM74A7A6NL05 159 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 H0YCG3 227 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 GMFGO60234 142 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 IGHV3-9P01782 118 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 MELTFP08582 738 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 PRG2P13727 222 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 SDC1P18827 310 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 HNRNPA2B1P22626 353 aaKnown RBP4.29□□□□□ -1.72
PRKDC-208ENST00000536710 ADSSP30520 456 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 EMDP50402 254 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 PRELPP51888 382 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 RPS6P62753 249 aaKnown RBP4.29□□□□□ -1.72
PRKDC-208ENST00000536710 PLOD1Q02809 727 aaPredicted RBP4.29□□□□□ -1.72
PRKDC-208ENST00000536710 NADK2Q4G0N4 442 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 FAM74A3Q4VXF1 159 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 LRRC70Q7Z2Q7 622 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 PARGQ86W56 976 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 OR5AU1Q8NGC0 362 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 OR6T1Q8NGN1 323 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 WBP1Q96G27 269 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 TTC25Q96NG3 672 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 ERP44Q9BS26 406 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 TRIM6Q9C030 488 aaPredicted RBP4.29□□□□□ -1.72
PRKDC-208ENST00000536710 RAB33BQ9H082 229 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 TMEM117Q9H0C3 514 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 GPN2Q9H9Y4 310 aaPredicted RBP4.29□□□□□ -1.72
PRKDC-208ENST00000536710 CALHM2Q9HA72 323 aa4.29□□□□□ -1.72
PRKDC-208ENST00000536710 CCT8L1PA6NM43 557 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 E9PAM4 449 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 DUX1O43812 170 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 LCMT2O60294 686 aaKnown RBP4.28□□□□□ -1.72
PRKDC-208ENST00000536710 STX11O75558 287 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 DRD5P21918 477 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 MAGEA5P43359 124 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 VEGFCP49767 419 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 HMGCS2P54868 508 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 PPP1R3AQ16821 1122 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 CYBRD1Q53TN4 286 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 DPY19L4Q7Z388 723 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 HIPK1Q86Z02 1210 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 ZDHHC21Q8IVQ6 265 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 OR2L2Q8NH16 312 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 ZBED6CLQ96FA7 236 aaPredicted RBP4.28□□□□□ -1.72
PRKDC-208ENST00000536710 SDSLQ96GA7 329 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 PIWIL1Q96J94 861 aaKnown RBP4.28□□□□□ -1.72
PRKDC-208ENST00000536710 MCCC1Q96RQ3 725 aaPredicted RBP4.28□□□□□ -1.72
PRKDC-208ENST00000536710 TEX13BQ9BXU2 312 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 PUS3Q9BZE2 481 aaKnown RBP4.28□□□□□ -1.72
PRKDC-208ENST00000536710 UBXN6Q9BZV1 441 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 COMMD4Q9H0A8 199 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 DHRS4-AS1Q9P1J3 65 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 CHRNA9Q9UGM1 479 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 RNF6Q9Y252 685 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 EIF3LQ9Y262 564 aaKnown RBP4.28□□□□□ -1.72
PRKDC-208ENST00000536710 NTNG1Q9Y2I2 539 aa4.28□□□□□ -1.72
PRKDC-208ENST00000536710 CARMIL1Q5VZK9 1371 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 TRAV9-2A0A087WT02 112 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 TRIM49BA6NDI0 452 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 CLDN5O00501 218 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 PHF1O43189 567 aaPredicted RBP4.27□□□□□ -1.73
PRKDC-208ENST00000536710 GAS8-AS1O95177 125 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 PRAMEF12O95522 483 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 HPP00738 406 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 JCHAINP01591 159 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 CHRNA1P02708 482 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 KRT8P05787 483 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 CLUP10909 449 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 RPA2P15927 270 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 H2AFXP16104 143 aaPredicted RBP4.27□□□□□ -1.73
PRKDC-208ENST00000536710 ACADSP16219 412 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 IDSP22304 550 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 PSMA2P25787 234 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 IST1P53990 364 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 ZFP36L1Q07352 338 aaKnown RBP4.27□□□□□ -1.73
PRKDC-208ENST00000536710 CHI3L2Q15782 390 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 PDK4Q16654 411 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 MICAQ29983 383 aa4.27□□□□□ -1.73
PRKDC-208ENST00000536710 LINC01620Q4KN68 170 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms