RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 B3GALNT1O75752 331 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 SYNGR4O95473 234 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 IGLV1-47P01700 117 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 PGK2P07205 417 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 ETS1P14921 441 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 IGHV1-2P23083 117 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 UGT1A3P35503 534 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 GPC3P51654 580 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 PPP1R8Q12972 351 aaKnown RBP3.44□□□□□ -1.86
PRKDC-205ENST00000535375 IL18R1Q13478 541 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 LGSNQ5TDP6 509 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 ZNF530Q6P9A1 599 aaPredicted RBP3.44□□□□□ -1.86
PRKDC-205ENST00000535375 ZCCHC12Q6PEW1 402 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 CATSPER4Q7RTX7 472 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 KDM8Q8N371 416 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 TEX9Q8N6V9 391 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 DLX4Q92988 240 aaPredicted RBP3.44□□□□□ -1.86
PRKDC-205ENST00000535375 ZNF799Q96GE5 643 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 DEFB118Q96PH6 123 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 KCNK16Q96T55 309 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 DPH7Q9BTV6 452 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 TSSK1BQ9BXA7 367 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 HPF1Q9NWY4 346 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 ACTR3BQ9P1U1 418 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 PURGQ9UJV8 347 aaKnown RBP3.44□□□□□ -1.86
PRKDC-205ENST00000535375 KLHDC2Q9Y2U9 406 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 PTPRUQ92729 1446 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 UBE4BO95155 1302 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 FAM231BA6NCW3 169 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 CFAP73A6NFT4 308 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 HSF2BPO75031 334 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 SDC1P18827 310 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 TMOD1P28289 359 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 NLRP11P59045 1033 aaKnown RBP3.43□□□□□ -1.86
PRKDC-205ENST00000535375 HTD2P86397 168 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 NME3Q13232 169 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 BTG3Q14201 252 aaPredicted RBP3.43□□□□□ -1.86
PRKDC-205ENST00000535375 CAMK4Q16566 473 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 C12orf60Q5U649 245 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 SCARA5Q6ZMJ2 495 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 CENPSQ8N2Z9 138 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 CCNYQ8ND76 341 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 TBC1D31Q96DN5 1066 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 SLC25A38Q96DW6 304 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 C14orf79Q96F83 325 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 SAMD8Q96LT4 415 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 ZNF285Q96NJ3 590 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 TAS2R3Q9NYW6 316 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 NDUFA13Q9P0J0 144 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 LHX3Q9UBR4 397 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 HOOK1Q9UJC3 728 aaKnown RBP3.43□□□□□ -1.86
PRKDC-205ENST00000535375 FKBP7Q9Y680 259 aa3.43□□□□□ -1.86
PRKDC-205ENST00000535375 TDRD6O60522 2096 aaKnown RBP3.43□□□□□ -1.86
PRKDC-205ENST00000535375 NPC1L1Q9UHC9 1359 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.42□□□□□ -1.86
PRKDC-205ENST00000535375 PDXKO00764 312 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 BUB1O43683 1085 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 SDC3O75056 442 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 TRIM16O95361 564 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 PGK1P00558 417 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 TGFAP01135 160 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 CCDC192P0DO97 292 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 CAMLGP49069 296 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 POU3F4P49335 361 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 SGSHP51688 502 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 RIPPLY3P57055 190 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 SSTP61278 116 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 IL9RQ01113 521 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 DCAF4L1Q3SXM0 396 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 OTPQ5XKR4 325 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 WSCD1Q658N2 575 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 WDR88Q6ZMY6 472 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 RBM43Q6ZSC3 357 aaKnown RBP3.42□□□□□ -1.86
PRKDC-205ENST00000535375 TAF8Q7Z7C8 310 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 GPBP1Q86WP2 473 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 RNF175Q8N4F7 328 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 LEMD2Q8NC56 503 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 DQX1Q8TE96 717 aaKnown RBP3.42□□□□□ -1.86
PRKDC-205ENST00000535375 TMEM45BQ96B21 275 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 ELSPBP1Q96BH3 223 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 C11orf24Q96F05 449 aaPredicted RBP3.42□□□□□ -1.86
PRKDC-205ENST00000535375 NSMCE2Q96MF7 247 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 KRT23Q9C075 422 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 DDX47Q9H0S4 455 aaKnown RBP3.42□□□□□ -1.86
PRKDC-205ENST00000535375 GLT8D2Q9H1C3 349 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 EHD1Q9H4M9 534 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 FAM124BQ9H5Z6 455 aaPredicted RBP3.42□□□□□ -1.86
PRKDC-205ENST00000535375 ELOVL2Q9NXB9 296 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.42□□□□□ -1.86
PRKDC-205ENST00000535375 MIOXQ9UGB7 285 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 FAM153AQ9UHL3 310 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 ATP6V0A2Q9Y487 856 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 CLCA3PQ9Y6N3 262 aa3.42□□□□□ -1.86
PRKDC-205ENST00000535375 A0A0U1RRA0 63 aa3.41□□□□□ -1.86
PRKDC-205ENST00000535375 ARHGAP42A6NI28 874 aa3.41□□□□□ -1.86
PRKDC-205ENST00000535375 WWP2O00308 870 aa3.41□□□□□ -1.86
PRKDC-205ENST00000535375 OR7A17O14581 309 aa3.41□□□□□ -1.86
PRKDC-205ENST00000535375 RASGRF2O14827 1237 aa3.41□□□□□ -1.86
PRKDC-205ENST00000535375 EMC8O43402 210 aa3.41□□□□□ -1.86
PRKDC-205ENST00000535375 MT-ATP6P00846 226 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms