RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 RAB3IL1Q8TBN0 382 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 RND1Q92730 232 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 SDCCAG3Q96C92 435 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 COQ8BQ96D53 544 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 GIMAP5Q96F15 307 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 OR2B2Q9GZK3 357 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 NEUROD4Q9HD90 331 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 EQTNQ9NQ60 294 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 NKIRAS1Q9NYS0 192 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 FAM215AQ9Y5M1 114 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 CENPEQ02224 2701 aa12.59□□□□□ -0.39
TMEM258-203ENST00000535297 A0A1W2PRB8 838 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 KCNH1O95259 989 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 GRNP28799 593 aaKnown RBP12.58□□□□□ -0.4
TMEM258-203ENST00000535297 CHRNB4P30926 498 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 GABRA3P34903 492 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 GCKP35557 465 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 GAS1P54826 345 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 CLDN8P56748 225 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 NUP107P57740 925 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 NOTCH2Q04721 2471 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 CDSNQ15517 529 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 EIPR1Q53HC9 387 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 AGBL2Q5U5Z8 902 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 SP5Q6BEB4 398 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-203ENST00000535297 VASNQ6EMK4 673 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 RTL6Q6ICC9 239 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 MFSD12Q6NUT3 480 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 ZCCHC12Q6PEW1 402 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 PLCZ1Q86YW0 608 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 TRIM42Q8IWZ5 723 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 PM20D2Q8IYS1 436 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 KRTCAP2Q8N6L1 136 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 WDSUB1Q8N9V3 476 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 PSMA8Q8TAA3 256 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 MGARPQ8TDB4 240 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 CA5BP1Q8WTZ4 195 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 OR5P2Q8WZ92 322 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 FAM120BQ96EK7 910 aaKnown RBP12.58□□□□□ -0.4
TMEM258-203ENST00000535297 PPP1R36Q96LQ0 422 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 TTYH2Q9BSA4 534 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 NUF2Q9BZD4 464 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 BHLHE41Q9C0J9 482 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-203ENST00000535297 PRDM14Q9GZV8 571 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 AKTIPQ9H8T0 292 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 MEAF6Q9HAF1 191 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 SERHLQ9NQF3 203 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-203ENST00000535297 THAP1Q9NVV9 213 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 FAM120CQ9NX05 1096 aaKnown RBP12.58□□□□□ -0.4
TMEM258-203ENST00000535297 RNF6Q9Y252 685 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 ARHGAP21Q5T5U3 1957 aa12.58□□□□□ -0.4
TMEM258-203ENST00000535297 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 FAM47E-STBD1D6RA91 191 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 HNRNPRO43390 633 aaKnown RBP12.57□□□□□ -0.4
TMEM258-203ENST00000535297 FADS1O60427 444 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 SNNO75324 88 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-203ENST00000535297 EFNA1P20827 205 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-203ENST00000535297 SRD5A2P31213 254 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 PRIM2P49643 509 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 PRKAG1P54619 331 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 PMPCAQ10713 525 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 LSM12Q3MHD2 195 aaKnown RBP12.57□□□□□ -0.4
TMEM258-203ENST00000535297 WIPI1Q5MNZ9 446 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-203ENST00000535297 EXOSC6Q5RKV6 272 aaKnown RBP12.57□□□□□ -0.4
TMEM258-203ENST00000535297 ATG16L1Q676U5 607 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 ULK2Q8IYT8 1036 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 OR56A1Q8NGH5 318 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 SFXN5Q8TD22 340 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 GPR151Q8TDV0 419 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 SLC9A6Q92581 669 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 RMND5BQ96G75 393 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-203ENST00000535297 TIMP4Q99727 224 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 DUSP26Q9BV47 211 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 UGT2B28Q9BY64 529 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 SDHAF3Q9NRP4 125 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 ZCCHC3Q9NUD5 404 aaKnown RBP12.57□□□□□ -0.4
TMEM258-203ENST00000535297 PNPOQ9NVS9 261 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 SLC6A5Q9Y345 797 aa12.57□□□□□ -0.4
TMEM258-203ENST00000535297 GXYLT2A0PJZ3 443 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 AHRRA9YTQ3 701 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 SCO2O43819 266 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 C6orf47O95873 294 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 ACTL6AO96019 429 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 ALOX5P09917 674 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 GLI4P10075 376 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 ACP2P11117 423 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 BMP7P18075 431 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 LBPP18428 481 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 LCN1P31025 176 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 RFX3P48380 749 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 CLK3P49761 638 aaKnown RBP12.56□□□□□ -0.4
TMEM258-203ENST00000535297 DIO3P55073 304 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 SF3B4Q15427 424 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM258-203ENST00000535297 OGFOD2Q6N063 350 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 YRDCQ86U90 279 aaKnown RBP12.56□□□□□ -0.4
TMEM258-203ENST00000535297 COX18Q8N8Q8 333 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 SLC16A11Q8NCK7 471 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 OR4K17Q8NGC6 315 aa12.56□□□□□ -0.4
TMEM258-203ENST00000535297 OR14L1PQ8NHC6 308 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms