RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ZBTB8OSQ8IWT0 167 aa3□□□□□ -1.93
USP48-215ENST00000534705 NELFCDQ8IXH7 590 aa3□□□□□ -1.93
USP48-215ENST00000534705 ARHGAP24Q8N264 748 aa3□□□□□ -1.93
USP48-215ENST00000534705 KDM8Q8N371 416 aa3□□□□□ -1.93
USP48-215ENST00000534705 ZNF614Q8N883 585 aa3□□□□□ -1.93
USP48-215ENST00000534705 TMEM178AQ8NBL3 297 aa3□□□□□ -1.93
USP48-215ENST00000534705 SPATA4Q8NEY3 305 aa3□□□□□ -1.93
USP48-215ENST00000534705 OR52K2Q8NGK3 314 aa3□□□□□ -1.93
USP48-215ENST00000534705 BRSK1Q8TDC3 778 aa3□□□□□ -1.93
USP48-215ENST00000534705 ST7LQ8TDW4 575 aa3□□□□□ -1.93
USP48-215ENST00000534705 NAT14Q8WUY8 206 aa3□□□□□ -1.93
USP48-215ENST00000534705 DNAJC9Q8WXX5 260 aa3□□□□□ -1.93
USP48-215ENST00000534705 DNASE1L2Q92874 299 aa3□□□□□ -1.93
USP48-215ENST00000534705 SLAMF9Q96A28 289 aa3□□□□□ -1.93
USP48-215ENST00000534705 PGM2Q96G03 612 aa3□□□□□ -1.93
USP48-215ENST00000534705 SNF8Q96H20 258 aa3□□□□□ -1.93
USP48-215ENST00000534705 PRAC1Q96KF2 57 aa3□□□□□ -1.93
USP48-215ENST00000534705 ZNF558Q96NG5 402 aa3□□□□□ -1.93
USP48-215ENST00000534705 OLFM3Q96PB7 478 aa3□□□□□ -1.93
USP48-215ENST00000534705 KRT12Q99456 494 aa3□□□□□ -1.93
USP48-215ENST00000534705 OLFM1Q99784 485 aa3□□□□□ -1.93
USP48-215ENST00000534705 CCT7Q99832 543 aa3□□□□□ -1.93
USP48-215ENST00000534705 CTRCQ99895 268 aa3□□□□□ -1.93
USP48-215ENST00000534705 TMEM175Q9BSA9 504 aa3□□□□□ -1.93
USP48-215ENST00000534705 CACNG6Q9BXT2 260 aa3□□□□□ -1.93
USP48-215ENST00000534705 DDX47Q9H0S4 455 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 S1PR5Q9H228 398 aa3□□□□□ -1.93
USP48-215ENST00000534705 P2RY12Q9H244 342 aa3□□□□□ -1.93
USP48-215ENST00000534705 TPK1Q9H3S4 243 aa3□□□□□ -1.93
USP48-215ENST00000534705 TMEM206Q9H813 350 aa3□□□□□ -1.93
USP48-215ENST00000534705 AKIRIN1Q9H9L7 192 aaPredicted RBP3□□□□□ -1.93
USP48-215ENST00000534705 FANCFQ9NPI8 374 aa3□□□□□ -1.93
USP48-215ENST00000534705 PRMT8Q9NR22 394 aaPredicted RBP3□□□□□ -1.93
USP48-215ENST00000534705 GKN1Q9NS71 199 aa3□□□□□ -1.93
USP48-215ENST00000534705 SLC35D1Q9NTN3 355 aa3□□□□□ -1.93
USP48-215ENST00000534705 PLCXD1Q9NUJ7 323 aa3□□□□□ -1.93
USP48-215ENST00000534705 DNAJC17Q9NVM6 304 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 ZNHIT6Q9NWK9 470 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3□□□□□ -1.93
USP48-215ENST00000534705 SPG21Q9NZD8 308 aa3□□□□□ -1.93
USP48-215ENST00000534705 FETUBQ9UGM5 382 aa3□□□□□ -1.93
USP48-215ENST00000534705 FBXW2Q9UKT8 454 aa3□□□□□ -1.93
USP48-215ENST00000534705 SNX12Q9UMY4 172 aa3□□□□□ -1.93
USP48-215ENST00000534705 SNX7Q9UNH6 387 aa3□□□□□ -1.93
USP48-215ENST00000534705 STYXL1Q9Y6J8 313 aa3□□□□□ -1.93
USP48-215ENST00000534705 WDR87Q6ZQQ6 2873 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 TMEM131Q92545 1883 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 LRRK1Q38SD2 2015 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 SMIM28A0A1B0GU29 152 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 C13orf42A0A1B0GVH6 325 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 TTC26A0AVF1 554 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 MSGN1A6NI15 193 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 KRTAP16-1A8MUX0 517 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 FAM25EA8MYX2 175 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 K7ERI5 159 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 AP3B1O00203 1094 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 CACNB4O00305 520 aaPredicted RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 ANGPT2O15123 496 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 SLC22A1O15245 554 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ALOX15BO15296 676 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 IDH3BO43837 385 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 VEGFDO43915 354 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 CRCPO75575 148 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 TOM1L1O75674 476 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ATP5HO75947 161 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 BCL10O95999 233 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 RLN1P04808 185 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 LYNP07948 512 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 NUDT17P0C025 328 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 MCF2P10911 925 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 KCNE1P15382 129 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 EPCAMP16422 314 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 TCP1P17987 556 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 ADRA2CP18825 462 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ITIH1P19827 911 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 CASP1P29466 404 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 PBLDP30039 288 aaPredicted RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 VHLP40337 213 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 CLCN4P51793 760 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ADARP55265 1226 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 DMPKQ09013 629 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 HSPB3Q12988 150 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 PTPRCAPQ14761 206 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 UPP1Q16831 310 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ODF4Q2M2E3 257 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 DCAF4L1Q3SXM0 396 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ZCWPW2Q504Y3 356 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 CCDC122Q5T0U0 273 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 SPOUT1Q5T280 376 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 RNASEH2BQ5TBB1 312 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 CYP4A22Q5TCH4 519 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 C6orf163Q5TEZ5 329 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 RESP18Q5W5W9 173 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 FUT10Q6P4F1 479 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 WDR59Q6PJI9 974 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 FIP1L1Q6UN15 594 aaKnown RBP2.99□□□□□ -1.93
USP48-215ENST00000534705 Q6ZSR9 355 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 LPCAT2Q7L5N7 544 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ZNF720Q7Z2F6 126 aa2.99□□□□□ -1.93
USP48-215ENST00000534705 ABI3BPQ7Z7G0 1075 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms