RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 RAB3IL1Q8TBN0 382 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 RNF138Q8WVD3 245 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 HOXB13Q92826 284 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-210ENST00000532935 ARL8AQ96BM9 186 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 GIMAP5Q96F15 307 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 ATP6V1G3Q96LB4 118 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 MS4A4EQ96PG1 132 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 MEAF6Q9HAF1 191 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 SIRT3Q9NTG7 399 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-210ENST00000532935 MRTO4Q9UKD2 239 aaKnown RBP14.03□□□□□ -0.16
CPSF1-210ENST00000532935 MAPRE3Q9UPY8 281 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 WIF1Q9Y5W5 379 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 FIGNL2A6NMB9 653 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 PRSS44E7EML9 344 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 IL33O95760 270 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 ACVR2AP27037 513 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 EVI2BP34910 448 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 DIO3P55073 304 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 PRR5P85299 388 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 VPS26BQ4G0F5 336 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 WLSQ5T9L3 541 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 TRIM42Q8IWZ5 723 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 LRRC34Q8IZ02 419 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 RPRMLQ8N4K4 120 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 CDRT4Q8N9R6 151 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 WDSUB1Q8N9V3 476 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 GPR151Q8TDV0 419 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 OR5P2Q8WZ92 322 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 FAM120BQ96EK7 910 aaKnown RBP14.02□□□□□ -0.17
CPSF1-210ENST00000532935 DUSP26Q9BV47 211 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 BHLHE41Q9C0J9 482 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-210ENST00000532935 MANSC1Q9H8J5 431 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 SERHLQ9NQF3 203 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 KLF2Q9Y5W3 355 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-210ENST00000532935 ADGRG4Q8IZF6 3080 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 CACNA1DQ01668 2161 aa14.02□□□□□ -0.17
CPSF1-210ENST00000532935 ITPR2Q14571 2701 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 C15orf38-AP3S2A0A0A6YYH1 394 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 GXYLT2A0PJZ3 443 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 WDR1O75083 606 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 CBR3O75828 277 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 NKX2-2O95096 273 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 KCNH1O95259 989 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 ACP2P11117 423 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 LBPP18428 481 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 DCTP40126 519 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 GAS1P54826 345 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 PSMD4P55036 377 aaKnown RBP14.01□□□□□ -0.17
CPSF1-210ENST00000532935 CDSNQ15517 529 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 PGS1Q32NB8 556 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 LSM12Q3MHD2 195 aaKnown RBP14.01□□□□□ -0.17
CPSF1-210ENST00000532935 EIPR1Q53HC9 387 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 MFSD12Q6NUT3 480 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 ZCCHC12Q6PEW1 402 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 CAMKMTQ7Z624 323 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 PLCZ1Q86YW0 608 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 ARFGAP2Q8N6H7 521 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 FAM83FQ8NEG4 500 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-210ENST00000532935 PSMA8Q8TAA3 256 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 FBXO30Q8TB52 745 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 PIK3R3Q92569 461 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 SLC9A6Q92581 669 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 RMND5BQ96G75 393 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-210ENST00000532935 ZCCHC3Q9NUD5 404 aaKnown RBP14.01□□□□□ -0.17
CPSF1-210ENST00000532935 FLRT3Q9NZU0 649 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 MARCOQ9UEW3 520 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-210ENST00000532935 FAM215AQ9Y5M1 114 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 SNX8Q9Y5X2 465 aa14.01□□□□□ -0.17
CPSF1-210ENST00000532935 HCFC1P51610 2035 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 SDHDO14521 159 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 HDAC3O15379 428 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 SCO2O43819 266 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 FADS1O60427 444 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 CLDN14O95500 239 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 C6orf47O95873 294 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 KITP10721 976 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 HTR1EP28566 365 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 RFX3P48380 749 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 PRIM2P49643 509 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 NUP107P57740 925 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 OCRLQ01968 901 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 CRYZQ08257 329 aaKnown RBP14□□□□□ -0.17
CPSF1-210ENST00000532935 PMPCAQ10713 525 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 NHSL2Q5HYW2 709 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 WIPI1Q5MNZ9 446 aaPredicted RBP14□□□□□ -0.17
CPSF1-210ENST00000532935 ZNF787Q6DD87 383 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 RTL6Q6ICC9 239 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 OGFOD2Q6N063 350 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 YRDCQ86U90 279 aaKnown RBP14□□□□□ -0.17
CPSF1-210ENST00000532935 SLC16A11Q8NCK7 471 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 RND1Q92730 232 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 SDCCAG3Q96C92 435 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 C16orf58Q96GQ5 468 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 YIPF4Q9BSR8 244 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 DPY30Q9C005 99 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 OR2B2Q9GZK3 357 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 CXorf36Q9H7Y0 433 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 NEUROD4Q9HD90 331 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 ALKBH4Q9NXW9 302 aa14□□□□□ -0.17
CPSF1-210ENST00000532935 COQ3Q9NZJ6 369 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms