RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 TMEM247A6NEH6 219 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 ERVH48-1M5A8F1 160 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 SLC28A2O43868 658 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 KCNK2O95069 426 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 NADKO95544 446 aaPredicted RBP13.2□□□□□ -0.3
COL16A1-217ENST00000532877 AK1P00568 194 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 NR2F1P10589 423 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 ME2P23368 584 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 ITGA3P26006 1051 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 HTR1EP28566 365 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 PIGAP37287 484 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 KCNJ2P63252 427 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 PSPHP78330 225 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 MRPS22P82650 360 aaKnown RBP13.2□□□□□ -0.3
COL16A1-217ENST00000532877 CDK6Q00534 326 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 SCARB2Q14108 478 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 SYPL1Q16563 259 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 DEFB109BQ30KR1 87 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 ARHGAP11BQ3KRB8 267 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 CYP27C1Q4G0S4 372 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 CCNJQ5T5M9 372 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 BROXQ5VW32 411 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 FCRLBQ6BAA4 426 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 H3F3CQ6NXT2 135 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 PGM2L1Q6PCE3 622 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 LRRC69Q6ZNQ3 347 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 GALNT10Q86SR1 603 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 SLC34A3Q8N130 599 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 ARMC10Q8N2F6 343 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 SLC5A8Q8N695 610 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 SIRT6Q8N6T7 355 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 ANKFN1Q8N957 763 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 PSMF1Q92530 271 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 UTP4Q969X6 686 aaKnown RBP13.2□□□□□ -0.3
COL16A1-217ENST00000532877 CCDC124Q96CT7 223 aaKnown RBP13.2□□□□□ -0.3
COL16A1-217ENST00000532877 HSPBAP1Q96EW2 488 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 TRNT1Q96Q11 434 aaKnown RBP13.2□□□□□ -0.3
COL16A1-217ENST00000532877 LHPPQ9H008 270 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 MMADHCQ9H3L0 296 aaPredicted RBP13.2□□□□□ -0.3
COL16A1-217ENST00000532877 SUCOQ9UBS9 1254 aaKnown RBP13.2□□□□□ -0.3
COL16A1-217ENST00000532877 LIPT1Q9Y234 373 aa13.2□□□□□ -0.3
COL16A1-217ENST00000532877 A8MUI8 341 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 C5orf58C9J3I9 102 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 MAN1A2O60476 641 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 ZNF354AO60765 605 aaPredicted RBP13.19□□□□□ -0.3
COL16A1-217ENST00000532877 OR2J2O76002 312 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 H6PDO95479 791 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 IGKV1D-16P01601 117 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 CHRM4P08173 479 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 ABCD3P28288 659 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 MSX2P35548 267 aaPredicted RBP13.19□□□□□ -0.3
COL16A1-217ENST00000532877 CRISP3P54108 245 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 NRG3P56975 720 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 HPCAP84074 193 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 SRSF1Q07955 248 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL16A1-217ENST00000532877 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 BNIP2Q12982 314 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 GNA13Q14344 377 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 FXNQ16595 210 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 DECR1Q16698 335 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 GPAT3Q53EU6 434 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 RPS26P11Q5JNZ5 115 aaPredicted RBP13.19□□□□□ -0.3
COL16A1-217ENST00000532877 REEP3Q6NUK4 255 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 FIGNL1Q6PIW4 674 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 OLIG3Q7RTU3 272 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 RPS19BP1Q86WX3 136 aaKnown RBP13.19□□□□□ -0.3
COL16A1-217ENST00000532877 SLC30A8Q8IWU4 369 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 PRR22Q8IZ63 422 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 TAGAPQ8N103 731 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 GALNT16Q8N428 558 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 BCORP1Q8N888 145 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 HIPK4Q8NE63 616 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 TNIP2Q8NFZ5 429 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 TMBIM1Q969X1 311 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 OMA1Q96E52 524 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 SDF2Q99470 211 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 ZNF350Q9GZX5 532 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 ING2Q9H160 280 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 RUBCNLQ9H714 662 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 EGFL7Q9UHF1 273 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 SLC7A8Q9UHI5 535 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 ANGPT4Q9Y264 503 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 CPAMD8Q8IZJ3 1885 aa13.19□□□□□ -0.3
COL16A1-217ENST00000532877 ITGA10O75578 1167 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 GGT1P19440 569 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 AQP1P29972 269 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 RFX3P48380 749 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 SOX8P57073 446 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 MLF1P58340 268 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 VEZF1Q14119 521 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL16A1-217ENST00000532877 PRAMEF8Q5VWM4 474 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 PRAMEF7Q5VXH5 474 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 B3GNTL1Q67FW5 361 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-217ENST00000532877 FRRS1Q6ZNA5 592 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 ZAR1Q86SH2 424 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 PTRH1Q86Y79 214 aaKnown RBP13.18□□□□□ -0.3
COL16A1-217ENST00000532877 METTL25Q8N6Q8 603 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 FAM110BQ8TC76 370 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 SLC22A8Q8TCC7 542 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms