RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ZNF223Q9UK11 482 aaPredicted RBP20.33■□□□□ 0.85
PACSIN3-209ENST00000532457 PTRH2Q9Y3E5 179 aaKnown RBP20.33■□□□□ 0.85
PACSIN3-209ENST00000532457 CHST2Q9Y4C5 530 aa20.33■□□□□ 0.85
PACSIN3-209ENST00000532457 FESP07332 822 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 LIPCP11150 499 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 POU6F2P78424 691 aaPredicted RBP20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 CPEB2Q7Z5Q1 589 aaKnown RBP20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 VRK2Q86Y07 508 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 C9orf40Q8IXQ3 194 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 MORN4Q8NDC4 146 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 OR4D11Q8NGI4 311 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 METTL21AQ8WXB1 218 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 GATA6Q92908 595 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 POP5Q969H6 163 aaKnown RBP20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 CENPNQ96H22 339 aaPredicted RBP20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 LMF1Q96S06 567 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 TACO1Q9BSH4 297 aaKnown RBP20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 SAP130Q9H0E3 1048 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 MTHFD2LQ9H903 347 aaPredicted RBP20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 PRODH2Q9UF12 536 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 SH3GLB1Q9Y371 365 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 NINQ8N4C6 2090 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 FRYQ5TBA9 3013 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 NPIPA5A0A0B4J1W7 369 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 NPIPA7E9PJI5 369 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 RAD1O60671 282 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 PDE9AO76083 593 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 PRSS23O95084 383 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 NPIPA8P0DM63 369 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 MAPK14Q16539 360 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 SPPL2AQ8TCT8 520 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 CT55Q8WUE5 264 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 VNN3Q9NY84 501 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 SEC14L3Q9UDX4 400 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 NXT1Q9UKK6 140 aaKnown RBP20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 WDR45Q9Y484 360 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 PCDHGB3Q9Y5G1 929 aa20.32■□□□□ 0.84
PACSIN3-209ENST00000532457 C9J4A7 227 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 DYRK3O43781 588 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 SERPINB7O75635 380 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 SEC24DO94855 1032 aaPredicted RBP20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 CST1P01037 141 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 LDLRP01130 860 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 VHLP40337 213 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 IST1P53990 364 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 PPP1R8Q12972 351 aaKnown RBP20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 ZNHIT3Q15649 155 aaPredicted RBP20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 GPR68Q15743 365 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 IFI44LQ53G44 452 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 AP1ARQ63HQ0 302 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 DTX1Q86Y01 620 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 KRT73Q86Y46 540 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 IL22RA1Q8N6P7 574 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 APCDD1LQ8NCL9 501 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 ICA1LQ8NDH6 482 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 BTBD9Q96Q07 612 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 AMBRA1Q9C0C7 1298 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 NXF5Q9H1B4 397 aaKnown RBP20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 CALML5Q9NZT1 146 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 NDUFAF4Q9P032 175 aa20.31■□□□□ 0.84
PACSIN3-209ENST00000532457 SAGE2PA6NJ88 616 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 STX11O75558 287 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 CD63P08962 238 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 FCGR1AP12314 374 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 TCN2P20062 427 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 FUT4P22083 530 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 TRHRP34981 398 aaPredicted RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 PPICP45877 212 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 RPS18P62269 152 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 FOXK2Q01167 660 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 PAPD4Q6PIY7 484 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 PIWIL3Q7Z3Z3 882 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 RBM45Q8IUH3 476 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 EPHX4Q8IUS5 362 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 LACC1Q8IV20 430 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 OR2Y1Q8NGV0 311 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 LZICQ8WZA0 190 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 SLC29A1Q99808 456 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 FAM117AQ9C073 453 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 LIN28AQ9H9Z2 209 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 SAC3D1A6NKF1 404 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 CLDN24A6NM45 220 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 ACOX3O15254 700 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 FABP3P05413 133 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 PABPC4LP0CB38 370 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 PIGAP37287 484 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 YAP1P46937 504 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 RFX3P48380 749 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 EBPQ15125 230 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 TMEM179BQ7Z7N9 219 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 CLIP4Q8N3C7 705 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 BCORP1Q8N888 145 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 ZNF248Q8NDW4 579 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 CIB1Q99828 191 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 SEMA4CQ9C0C4 833 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 COQ10BQ9H8M1 238 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 DNAJB9Q9UBS3 223 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 PPIEQ9UNP9 301 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 PADI2Q9Y2J8 665 aa20.3■□□□□ 0.84
PACSIN3-209ENST00000532457 MAGED1Q9Y5V3 778 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms