RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 PLOD3O60568 738 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 SRPX2O60687 465 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 B4GALT2O60909 372 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 COQ9O75208 318 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 BCAS1O75363 584 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 NME6O75414 186 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 INMTO95050 263 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 OR5F1O95221 314 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 MT-ND2P03891 347 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 IGHV4-34P06331 123 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 CHRM4P08173 479 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 INHBBP09529 407 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ZNF888P0CJ79 500 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 SRFP11831 508 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 CPMP14384 443 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PORP16435 677 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 MAGP20916 626 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 CHMP24386 653 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PSMB9P28065 219 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 CTSKP43235 329 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 SLC15A1P46059 708 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 IDH2P48735 452 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 XKP51811 444 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 SMSP52788 366 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 LIM2P55344 173 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 CLDN2P57739 230 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 RPS26P62854 115 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 BTN3A2P78410 334 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 DLX2Q07687 328 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 ST3GAL3Q11203 375 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 GPR18Q14330 331 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 IRF3Q14653 427 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ZNF846Q147U1 533 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 LASP1Q14847 261 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 LARS2Q15031 903 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 NCF4Q15080 339 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PTGES3Q15185 160 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 SYPL1Q16563 259 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ARHGAP11BQ3KRB8 267 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 FGD3Q5JSP0 725 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ENTPD8Q5MY95 495 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 C12orf73Q69YU5 71 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 MFSD12Q6NUT3 480 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ARMC6Q6NXE6 501 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 C1orf94Q6P1W5 598 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 FBXO42Q6P3S6 717 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 TUBA3EQ6PEY2 450 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PTCHD4Q6ZW05 846 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 AHSA2Q719I0 299 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 C16orf62Q7Z3J2 963 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 SZRD1Q7Z422 152 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ARHGAP22Q7Z5H3 698 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PARGQ86W56 976 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PLD3Q8IV08 490 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PEX5LQ8IYB4 626 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 FAM26EQ8N5C1 309 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 AMER2Q8N7J2 671 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 CDRT4Q8N9R6 151 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 MINDY2Q8NBR6 621 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 KCT2Q8NC54 265 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 KLHL6Q8WZ60 621 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 RAB8BQ92930 207 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 TSACCQ96A04 125 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 HSPA12BQ96MM6 686 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ZNF578Q96N58 590 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 OR7D2Q96RA2 312 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ARHGDIGQ99819 225 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 NIPSNAP1Q9BPW8 284 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PELOQ9BRX2 385 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 PHF7Q9BWX1 381 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 TMEM168Q9H0V1 697 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 SLC38A1Q9H2H9 487 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PIGUQ9H490 435 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 SERHL2Q9H4I8 314 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 SLC25A19Q9HC21 320 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 FBXO8Q9NRD0 319 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 RASSF1Q9NS23 344 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 MED17Q9NVC6 651 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 C14orf105Q9NVL8 296 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 KCMF1Q9P0J7 381 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 ERVK-18Q9QC07 812 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 REV1Q9UBZ9 1251 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 SEC14L4Q9UDX3 406 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 EPHA6Q9UF33 1036 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 FBXW2Q9UKT8 454 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 POMT2Q9UKY4 750 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 A4GNTQ9UNA3 340 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 C19orf53Q9UNZ5 99 aaPredicted RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 MRPS33Q9Y291 106 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 RPL36Q9Y3U8 105 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 PLEKHM1Q9Y4G2 1056 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 MTCH2Q9Y6C9 303 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 DOCK9Q9BZ29 2069 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 CACNA1IQ9P0X4 2223 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 TRANK1O15050 2925 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 CCDC88CQ9P219 2028 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 TRBV4-1A0A0J9YWV2 114 aa5.19□□□□□ -1.58
PCF11-205ENST00000530906 HTR3EA5X5Y0 456 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms