RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 PTGR1Q14914 329 aa13.12□□□□□ -0.31
CTSB-218ENST00000530624 EXOSC6Q5RKV6 272 aaKnown RBP13.12□□□□□ -0.31
CTSB-218ENST00000530624 IL23RQ5VWK5 629 aa13.12□□□□□ -0.31
CTSB-218ENST00000530624 ULK2Q8IYT8 1036 aa13.12□□□□□ -0.31
CTSB-218ENST00000530624 FAM83FQ8NEG4 500 aaPredicted RBP13.12□□□□□ -0.31
CTSB-218ENST00000530624 EFHD2Q96C19 240 aaPredicted RBP13.12□□□□□ -0.31
CTSB-218ENST00000530624 TLCD1Q96CP7 247 aa13.12□□□□□ -0.31
CTSB-218ENST00000530624 GIMAP5Q96F15 307 aa13.12□□□□□ -0.31
CTSB-218ENST00000530624 MS4A4EQ96PG1 132 aa13.12□□□□□ -0.31
CTSB-218ENST00000530624 PRPF18Q99633 342 aaKnown RBP13.12□□□□□ -0.31
CTSB-218ENST00000530624 TREX2Q9BQ50 279 aaPredicted RBP13.12□□□□□ -0.31
CTSB-218ENST00000530624 ZNF395Q9H8N7 513 aaPredicted RBP13.12□□□□□ -0.31
CTSB-218ENST00000530624 ATAD3AQ9NVI7 634 aa13.12□□□□□ -0.31
CTSB-218ENST00000530624 NOP53Q9NZM5 478 aaKnown RBP13.12□□□□□ -0.31
CTSB-218ENST00000530624 TNFRSF10DQ9UBN6 386 aa13.12□□□□□ -0.31
CTSB-218ENST00000530624 EIF3LQ9Y262 564 aaKnown RBP13.12□□□□□ -0.31
CTSB-218ENST00000530624 C15orf38-AP3S2A0A0A6YYH1 394 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 TMEM120BA0PK00 339 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 EMC8O43402 210 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 KCNH1O95259 989 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 LAMP1P11279 417 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 CYP4B1P13584 511 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 BGNP21810 368 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 SRD5A2P31213 254 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 CLDN8P56748 225 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 WDR4P57081 412 aaKnown RBP13.11□□□□□ -0.31
CTSB-218ENST00000530624 PRR5P85299 388 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 SF3B4Q15427 424 aaKnown RBP eCLIP13.11□□□□□ -0.313e-11■■■□□ 16.1
CTSB-218ENST00000530624 CPTPQ5TA50 214 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 RIPPLY2Q5TAB7 128 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 NUP43Q8NFH3 380 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 OR7A2PQ8NGA2 310 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 RAB3IL1Q8TBN0 382 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 FAM110BQ8TC76 370 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 OR5P2Q8WZ92 322 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 MARVELD3Q96A59 401 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 C1orf50Q9BV19 199 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 UGT2B28Q9BY64 529 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 BHLHE41Q9C0J9 482 aaPredicted RBP13.11□□□□□ -0.31
CTSB-218ENST00000530624 ENKD1Q9H0I2 346 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 HHATLQ9HCP6 504 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 SERHLQ9NQF3 203 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 SIRT3Q9NTG7 399 aaPredicted RBP13.11□□□□□ -0.31
CTSB-218ENST00000530624 FAM120CQ9NX05 1096 aaKnown RBP13.11□□□□□ -0.31
CTSB-218ENST00000530624 GIN1Q9NXP7 522 aa13.11□□□□□ -0.31
CTSB-218ENST00000530624 A0A1W2PRB8 838 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 C2orf72A6NCS6 295 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 SOX30O94993 753 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 EPPINO95925 133 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 NGFRP08138 427 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 G6PDP11413 515 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 CPN1P15169 458 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 IGFBP2P18065 325 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 BMP7P18075 431 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 LCN1P31025 176 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 GABRA3P34903 492 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 DIO3P55073 304 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 GFRA1P56159 465 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 TFF3Q07654 80 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 BST1Q10588 318 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 TOMM20Q15388 145 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 PDCD2Q16342 344 aaPredicted RBP13.1□□□□□ -0.31
CTSB-218ENST00000530624 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
CTSB-218ENST00000530624 EIPR1Q53HC9 387 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 WIPI1Q5MNZ9 446 aaPredicted RBP13.1□□□□□ -0.31
CTSB-218ENST00000530624 FADS6Q8N9I5 356 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 ABTB1Q969K4 478 aaPredicted RBP13.1□□□□□ -0.31
CTSB-218ENST00000530624 FAM120BQ96EK7 910 aaKnown RBP13.1□□□□□ -0.31
CTSB-218ENST00000530624 SPOCK3Q9BQ16 436 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 AKTIPQ9H8T0 292 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 MEAF6Q9HAF1 191 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 NEUROD4Q9HD90 331 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 SDHAF3Q9NRP4 125 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 SLC6A5Q9Y345 797 aa13.1□□□□□ -0.31
CTSB-218ENST00000530624 IGLV3-32A0A0A0MS00 114 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 A0A0G2JNJ9 132 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 CD8B2A6NJW9 211 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 B4DXG7 233 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 C19orf84I3L1E1 186 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 SNNO75324 88 aaPredicted RBP13.09□□□□□ -0.31
CTSB-218ENST00000530624 GCKP35557 465 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 TIMP3P35625 211 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 KIR3DL1P43629 444 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 ZFP36L2P47974 494 aaKnown RBP13.09□□□□□ -0.31
CTSB-218ENST00000530624 PRIM2P49643 509 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 DSCR4P56555 118 aaPredicted RBP13.09□□□□□ -0.31
CTSB-218ENST00000530624 MAGOHP61326 146 aaKnown RBP13.09□□□□□ -0.31
CTSB-218ENST00000530624 GANABQ14697 944 aaKnown RBP13.09□□□□□ -0.31
CTSB-218ENST00000530624 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTSB-218ENST00000530624 ACSF3Q4G176 576 aaPredicted RBP13.09□□□□□ -0.31
CTSB-218ENST00000530624 HHATQ5VTY9 493 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 OGFOD2Q6N063 350 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 DCHS2Q6V1P9 2916 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 WDR53Q7Z5U6 358 aaPredicted RBP13.09□□□□□ -0.31
CTSB-218ENST00000530624 YRDCQ86U90 279 aaKnown RBP13.09□□□□□ -0.31
CTSB-218ENST00000530624 LACC1Q8IV20 430 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 SLC16A11Q8NCK7 471 aa13.09□□□□□ -0.31
CTSB-218ENST00000530624 ZPLD1Q8TCW7 415 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms