RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CASD1Q96PB1 797 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 TRIM6Q9C030 488 aaPredicted RBP3.64□□□□□ -1.83
C11orf88-204ENST00000529661 HEXA-AS1Q9H8Q6 139 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 ADGRL4Q9HBW9 690 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 PALMDQ9NP74 551 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 B9D1Q9UPM9 204 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 RNF6Q9Y252 685 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 MRPL11Q9Y3B7 192 aaKnown RBP3.64□□□□□ -1.83
C11orf88-204ENST00000529661 COL5A2P05997 1499 aaPredicted RBP3.63□□□□□ -1.83
C11orf88-204ENST00000529661 TRIM49BA6NDI0 452 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 NUDT14O95848 222 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 MBD3O95983 291 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 IGHG3P01860 377 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 ASNSP08243 561 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 SNRPCP09234 159 aaKnown RBP3.63□□□□□ -1.83
C11orf88-204ENST00000529661 PDHBP11177 359 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 HSD17B1P14061 328 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 CAPN2P17655 700 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 DRD5P21918 477 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 GATA2P23769 480 aaPredicted RBP3.63□□□□□ -1.83
C11orf88-204ENST00000529661 OXTRP30559 389 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 STK19P49842 368 aaPredicted RBP3.63□□□□□ -1.83
C11orf88-204ENST00000529661 SULT1E1P49888 294 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 CSRP3P50461 194 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 NAPAP54920 295 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 TFDP1Q14186 410 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 LINC01620Q4KN68 170 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 VWA2Q5GFL6 755 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 FAM219BQ5XKK7 198 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 REP15Q6BDI9 236 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 BTNL3Q6UXE8 466 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 HACD2Q6Y1H2 254 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 LRRC49Q8IUZ0 686 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 EFCAB13Q8IY85 973 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 OR52K2Q8NGK3 314 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 CTNNBL1Q8WYA6 563 aaPredicted RBP3.63□□□□□ -1.83
C11orf88-204ENST00000529661 DNAJA3Q96EY1 480 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 VPS35Q96QK1 796 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 TBCDQ9BTW9 1192 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 TRIM9Q9C026 710 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 VPS37BQ9H9H4 285 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 CALHM2Q9HA72 323 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 GNB4Q9HAV0 340 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 ESM1Q9NQ30 184 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 DCAF13Q9NV06 445 aaKnown RBP3.63□□□□□ -1.83
C11orf88-204ENST00000529661 AP4B1Q9Y6B7 739 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 METP08581 1390 aa3.63□□□□□ -1.83
C11orf88-204ENST00000529661 MFSD2BA6NFX1 497 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 FOXI3A8MTJ6 420 aaPredicted RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 TM9SF1O15321 606 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 SPAG6O75602 509 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 IGHV3-9P01782 118 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 PCCBP05166 539 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 NOVP48745 357 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 POU3F4P49335 361 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 ACADVLP49748 655 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 GBX2P52951 348 aaPredicted RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 MFAP2P55001 183 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 SNTB2Q13425 540 aaKnown RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 MAJINQ3KP22 176 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 RABL6Q3YEC7 729 aaPredicted RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 NADK2Q4G0N4 442 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 CYBRD1Q53TN4 286 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 CCDC183Q5T5S1 534 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 CES3Q6UWW8 571 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 CCBE1Q6UXH8 406 aaPredicted RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 TMUB2Q71RG4 321 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 Q8N377 158 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 SUMF1Q8NBK3 374 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 OR5AU1Q8NGC0 362 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 OR2L2Q8NH16 312 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 BRSK1Q8TDC3 778 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 THRSPQ92748 146 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 CFAP53Q96M91 514 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 SOSTQ9BQB4 213 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 ERP44Q9BS26 406 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 GPN2Q9H9Y4 310 aaPredicted RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 ABCC13Q9NSE7 274 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 DUS2Q9NX74 493 aaKnown RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 CHRNA9Q9UGM1 479 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 EIF3LQ9Y262 564 aaKnown RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 EXOSC1Q9Y3B2 195 aaKnown RBP3.62□□□□□ -1.83
C11orf88-204ENST00000529661 CSAG2Q9Y5P2 127 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 GRIN2DO15399 1336 aa3.62□□□□□ -1.83
C11orf88-204ENST00000529661 H0YCG3 227 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 JAK2O60674 1132 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 MT-ND1P03886 318 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 MELTFP08582 738 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 EPB41P11171 864 aaKnown RBP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 PRG2P13727 222 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 ZNF33BQ06732 778 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 FCHO2Q0JRZ9 810 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 COX10Q12887 443 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 RIPK1Q13546 671 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 EIF2B1Q14232 305 aaKnown RBP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 RAB35Q15286 201 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 TMEM44Q2T9K0 475 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 ZNF506Q5JVG8 444 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 ACER2Q5QJU3 275 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 SPATA46Q5T0L3 261 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms