RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 SNX8Q9Y5X2 465 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 ZNF780BQ9Y6R6 833 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 ABCA1O95477 2261 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 CR1P17927 2039 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 A0A1W2PP18 115 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 E7ESA3 106 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 CLOCKO15516 846 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 DLX3O60479 287 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 SEC31AO94979 1220 aaKnown RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 CLDN9O95484 217 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 CBX7O95931 251 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 CRABP2P29373 138 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 ACVR1BP36896 505 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 CLK3P49761 638 aaKnown RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 EMDP50402 254 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 SUCLG1P53597 346 aaKnown RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 PNLIPRP2P54317 469 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 ALDH18A1P54886 795 aaKnown RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 CLDN15P56746 228 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 GPX6P59796 221 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 IFT88Q13099 833 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 GTF2H2Q13888 395 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 GANABQ14697 944 aaKnown RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 ERCC6LQ2NKX8 1250 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 TRMT12Q53H54 448 aaKnown RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 GRTP1Q5TC63 336 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 ADAM5Q6NVV9 412 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 GTF2H2CQ6P1K8 395 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 STAC2Q6ZMT1 411 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 BEND4Q6ZU67 534 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 CTAGE3PQ8IX95 158 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 L3MBTL4Q8NA19 623 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 WDR20Q8TBZ3 569 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 SMAP2Q8WU79 429 aaPredicted RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 GMPPAQ96IJ6 420 aaPredicted RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 BTBD9Q96Q07 612 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 TMEM204Q9BSN7 226 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 FAIM2Q9BWQ8 316 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 BEX2Q9BXY8 128 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 ACTR6Q9GZN1 396 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 OR10A4Q9H209 315 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 DSN1Q9H410 356 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 ESRP2Q9H6T0 727 aaKnown RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 ZNF639Q9UID6 485 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 LIPT1Q9Y234 373 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 GPR52Q9Y2T5 361 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 ACOT9Q9Y305 439 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 OR10H1Q9Y4A9 318 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 RNF115Q9Y4L5 304 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 AP4B1Q9Y6B7 739 aa8.07□□□□□ -1.12
VPS11-203ENST00000529545 ANK3Q12955 4377 aaKnown RBP8.07□□□□□ -1.12
VPS11-203ENST00000529545 CCDC189A1A4V9 331 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 CXorf49A8MYA2 514 aaPredicted RBP8.06□□□□□ -1.12
VPS11-203ENST00000529545 H0YC42 278 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 OVOL3O00110 214 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 SCO2O43819 266 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 TSPAN2O60636 221 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 ESRRBO95718 433 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 CD3EP07766 207 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 PCSK2P16519 638 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 SSTR1P30872 391 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 ALDH9A1P49189 494 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 CCNG1P51959 295 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 TPD52P55327 224 aaPredicted RBP8.06□□□□□ -1.12
VPS11-203ENST00000529545 GUSBP1Q15486 140 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 FAM83EQ2M2I3 478 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 GLYR1Q49A26 553 aaPredicted RBP8.06□□□□□ -1.12
VPS11-203ENST00000529545 FRG2Q64ET8 278 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 GOLGA7Q7Z5G4 137 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 CCDC91Q7Z6B0 441 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 KLHL7Q8IXQ5 586 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 METTL25Q8N6Q8 603 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 FADS6Q8N9I5 356 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 STEAP2Q8NFT2 490 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 RHEBL1Q8TAI7 183 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 ERP27Q96DN0 273 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 FRG2BQ96QU4 278 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 RHNO1Q9BSD3 238 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 NTMT1Q9BV86 223 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 HDHD5Q9BXW7 423 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 MRPL1Q9BYD6 325 aaKnown RBP8.06□□□□□ -1.12
VPS11-203ENST00000529545 TRIM31Q9BZY9 425 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 ALG2Q9H553 416 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 GLRX2Q9NS18 164 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 NMRK1Q9NWW6 199 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 MED11Q9P086 117 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 LPAR3Q9UBY5 353 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 CES1P1Q9UKY3 287 aa8.06□□□□□ -1.12
VPS11-203ENST00000529545 MCTS1Q9ULC4 181 aaKnown RBP8.06□□□□□ -1.12
VPS11-203ENST00000529545 TCRBV9S1A1TA0A576 114 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 OR2M5A3KFT3 312 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 ADAM11O75078 769 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 AQP8O94778 261 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 SYNGR4O95473 234 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 SOD3P08294 240 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CT45A8P0DMV1 189 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 CT45A9P0DMV2 189 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 MTHFD2P13995 350 aa8.05□□□□□ -1.12
VPS11-203ENST00000529545 PSMB1P20618 241 aaKnown RBP8.05□□□□□ -1.12
VPS11-203ENST00000529545 IL11P20809 199 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms