RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 HRGP04196 525 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 ICAM2P13598 275 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 SHC1P29353 583 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 BMP8BP34820 402 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 RNF144AP50876 292 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-214ENST00000528165 AADACL4Q5VUY2 407 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 SLC30A6Q6NXT4 461 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 SFXN4Q6P4A7 337 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 NXPE4Q6UWF7 544 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 FAM83HQ6ZRV2 1179 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-214ENST00000528165 Q6ZVL8 140 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 RRM2BQ7LG56 351 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 BMP8AQ7Z5Y6 402 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 OR5D16Q8NGK9 328 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 OR2T4Q8NH00 348 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 TRMT10AQ8TBZ6 339 aaKnown RBP13.77□□□□□ -0.21
CAPN1-214ENST00000528165 ST8SIA4Q92187 359 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 TIFAQ96CG3 184 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 PPP1R16AQ96I34 528 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 SLC22A12Q96S37 553 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 KCNK12Q9HB15 430 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 AHSPQ9NZD4 102 aa13.77□□□□□ -0.21
CAPN1-214ENST00000528165 H2AFY2Q9P0M6 372 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-214ENST00000528165 EXOGQ9Y2C4 368 aaKnown RBP13.77□□□□□ -0.21
CAPN1-214ENST00000528165 THBS2P35442 1172 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 NUP62P37198 522 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 GATMP50440 423 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 RAG2P55895 527 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 TSPAN31Q12999 210 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 CDC73Q6P1J9 531 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 C22orf39Q6P5X5 142 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 LIPIQ6XZB0 460 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 HSD11B1LQ7Z5J1 315 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 SLC9B2Q86UD5 537 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 TMEM173Q86WV6 379 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 ZNF687Q8N1G0 1237 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 RASGEF1AQ8N9B8 481 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 KLHL15Q96M94 604 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 LINC00052Q96N35 136 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 FCRL4Q96PJ5 515 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 SPATA5L1Q9BVQ7 753 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 ZNF436Q9C0F3 470 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 OR51I1Q9H343 314 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 METTL17Q9H7H0 456 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 DDX31Q9H8H2 851 aaKnown RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 ISG20L2Q9H9L3 353 aaKnown RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 BEX1Q9HBH7 125 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 PRAMEF27A3QJZ7 478 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 C1orf105O95561 183 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 C4BPBP20851 252 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 XPAP23025 273 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 TRIM23P36406 574 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 OR10A3P58181 314 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 TAS2R41P59536 307 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 TSPAN5P62079 268 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 RASSF6Q6ZTQ3 369 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 BMPERQ8N8U9 685 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 UBE2E3Q969T4 207 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 EXOSC8Q96B26 276 aaKnown RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 FAM46AQ96IP4 442 aaKnown RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 TMEM168Q9H0V1 697 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 SIRT3Q9NTG7 399 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 SDHAF2Q9NX18 166 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 MARK1Q9P0L2 795 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 SPATA2Q9UM82 520 aa13.76□□□□□ -0.21
CAPN1-214ENST00000528165 MRPS7Q9Y2R9 242 aaKnown RBP13.76□□□□□ -0.21
CAPN1-214ENST00000528165 TMEM88BA6NKF7 163 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 SURF4O15260 269 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 GNSP15586 552 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 F8A1P23610 371 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 HTR1FP30939 366 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 BDH1Q02338 343 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 TLE2Q04725 743 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 WASH2PQ6VEQ5 465 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 BTN2A1Q7KYR7 527 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 KANSL1Q7Z3B3 1105 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 BBS1Q8NFJ9 593 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 YIPF5Q969M3 257 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 ZFP3Q96NJ6 502 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 C1QTNF6Q9BXI9 259 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 ACTR6Q9GZN1 396 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 CLEC4AQ9UMR7 237 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 FRMPD3Q5JV73 1810 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 RTCAO00442 366 aaKnown RBP13.75□□□□□ -0.21
CAPN1-214ENST00000528165 GREM1O60565 184 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 UGT2B7P16662 529 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 SDHBP21912 280 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 POLR2LP62875 67 aaKnown RBP13.75□□□□□ -0.21
CAPN1-214ENST00000528165 SHC2P98077 582 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 KCNA10Q16322 511 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 ARL14EPQ8N8R7 260 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-214ENST00000528165 OR56B4Q8NH76 319 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 OSTF1Q92882 214 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 SLC35G5Q96KT7 338 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 SGPP1Q9BX95 441 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 KLHL1Q9NR64 748 aa13.75□□□□□ -0.21
CAPN1-214ENST00000528165 BABAM2Q9NXR7 383 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms