RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 VPS26BQ4G0F5 336 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 CES4AQ5XG92 561 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 KIRREL3Q8IZU9 778 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 ABTB1Q969K4 478 aaPredicted RBP30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 Q9UFV3 132 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 GIMAP2Q9UG22 337 aa30.08■■■□□ 2.41
SSSCA1-205ENST00000527920 FREM3P0C091 2139 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 FAM90A27PA6NNH2 459 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 SKAP2O75563 359 aaPredicted RBP30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 MYZAPP0CAP1 466 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 GRK2P25098 689 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 CHI3L2Q15782 390 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 YRDCQ86U90 279 aaKnown RBP30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 LACC1Q8IV20 430 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 FNDC5Q8NAU1 212 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 WDYHV1Q96HA8 205 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 MS4A4EQ96PG1 132 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 CENPHQ9H3R5 247 aa30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 FAM120CQ9NX05 1096 aaKnown RBP30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 EPB41L3Q9Y2J2 1087 aaPredicted RBP30.07■■■□□ 2.4
SSSCA1-205ENST00000527920 FADS1O60427 444 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 SNRPB2P08579 225 aaKnown RBP30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 MSX1P28360 303 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 ABCE1P61221 599 aaKnown RBP30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 SMU1Q2TAY7 513 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 SLC25A35Q3KQZ1 300 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 SEM1Q6ZVN7 128 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 NATD1Q8N6N6 113 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 CDRT4Q8N9R6 151 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 TUBGCP3Q96CW5 907 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 UCK2Q9BZX2 261 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 APCP25054 2843 aa30.06■■■□□ 2.4
SSSCA1-205ENST00000527920 CREBBPQ92793 2442 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 NKX2-6A6NCS4 301 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 HSPB2A8KAH6 182 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 ITM2AO43736 263 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 NKX2-2O95096 273 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 TIMP3P35625 211 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 MAD2L1Q13257 205 aaPredicted RBP30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 HSPB2Q16082 182 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 IL23RQ5VWK5 629 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 WDR53Q7Z5U6 358 aaPredicted RBP30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 OR14L1PQ8NHC6 308 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 NPDC1Q9NQX5 325 aaPredicted RBP30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 ATAD3AQ9NVI7 634 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 ASIC5Q9NY37 505 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 TAS2R10Q9NYW0 307 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 HAO1Q9UJM8 370 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 FBXL2Q9UKC9 423 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 RAP2CQ9Y3L5 183 aa30.05■■■□□ 2.4
SSSCA1-205ENST00000527920 GIMAP1-GIMAP5A0A087WTJ2 511 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 WDR91A4D1P6 747 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 CD8B2A6NJW9 211 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 EMC8O43402 210 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 KCNH1O95259 989 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 CPN1P15169 458 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 PRPS1L1P21108 318 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 GABRA3P34903 492 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 GFRA1P56159 465 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 C21orf58P58505 322 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 MPP2Q14168 576 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 PTGR1Q14914 329 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 DCST1Q5T197 706 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 NSUN5P2Q63ZY6 315 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 ZCCHC12Q6PEW1 402 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 ENPP6Q6UWR7 440 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 IFNEQ86WN2 208 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 ZNF295-AS1Q8N0V1 137 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 NUP43Q8NFH3 380 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 GIMAP5Q96F15 307 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 C14orf79Q96F83 325 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 C1orf50Q9BV19 199 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 EQTNQ9NQ60 294 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 SDHAF3Q9NRP4 125 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 CAMK2AQ9UQM7 478 aa30.04■■■□□ 2.4
SSSCA1-205ENST00000527920 SSTR2P30874 369 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 CEACAM8P31997 349 aaPredicted RBP30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 PRR5P85299 388 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 EMX2Q04743 252 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 MEX3BQ6ZN04 569 aaKnown RBP30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 ZNF781Q8N8C0 355 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 FADS6Q8N9I5 356 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 OR7A2PQ8NGA2 310 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 PSMA8Q8TAA3 256 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 ZPLD1Q8TCW7 415 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 COQ8BQ96D53 544 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 PRPF18Q99633 342 aaKnown RBP30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 EIF3LQ9Y262 564 aaKnown RBP30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 MYO9AB2RTY4 2548 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 LRBAP50851 2863 aa30.03■■■□□ 2.4
SSSCA1-205ENST00000527920 FBN2P35556 2912 aa30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 CLK3P49761 638 aaKnown RBP30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 MFSD12Q6NUT3 480 aa30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 AAGABQ6PD74 315 aa30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 RIMKLAQ8IXN7 391 aa30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 OR4K17Q8NGC6 315 aa30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 CALHM2Q9HA72 323 aa30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 KCNK9Q9NPC2 374 aa30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 SIRT3Q9NTG7 399 aaPredicted RBP30.02■■■□□ 2.4
SSSCA1-205ENST00000527920 PPP4R1LQ9P1A2 415 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms