RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 ARHGAP15Q53QZ3 475 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SPIN4Q56A73 249 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 C3P1Q6ZMU1 363 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 KANSL1Q7Z3B3 1105 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 TSEN54Q7Z6J9 526 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 LAS2Q8IYD9 372 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SYNPOQ8N3V7 929 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 STPG2Q8N412 459 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 FTMTQ8N4E7 242 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 UXS1Q8NBZ7 420 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 TRMT10AQ8TBZ6 339 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 MAFIPQ8WZ33 124 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 TM9SF4Q92544 642 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 TMEM203Q969S6 136 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 GTPBP3Q969Y2 492 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 GPR20Q99678 358 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 TREX2Q9BQ50 279 aaPredicted RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 H2AFJQ9BTM1 129 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 RERGLQ9H628 205 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 POMT2Q9UKY4 750 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 GSTK1Q9Y2Q3 226 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SNX11Q9Y5W9 270 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 NUBP2Q9Y5Y2 271 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 A0A1B0GVC2 190 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 H7C1Q1 480 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 CASKO14936 926 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SLC25A17O43808 307 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SLC19A2O60779 497 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 STX11O75558 287 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 CXCL14O95715 111 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 PTBP3O95758 552 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 CBX7O95931 251 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SULT1A3P0DMM9 295 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SULT1A4P0DMN0 295 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SMPD1P17405 629 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 PAICSP22234 425 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 HOXA11P31270 313 aaPredicted RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 CCR7P32248 378 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 AVPR1BP47901 424 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 GPR143P51810 404 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 CRISP1P54107 249 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 EPHA4P54764 986 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 CTBP2P56545 445 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 VSX2P58304 361 aaPredicted RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 SNRPGP62308 76 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 SNTB1Q13884 538 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 IHHQ14623 411 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 PTPRNQ16849 979 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 LY6KQ17RY6 165 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 DUOXA1Q1HG43 343 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 PLK5Q496M5 336 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 RPL13AP3Q6NVV1 102 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 NOTUMQ6P988 496 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 RBMS3Q6XE24 437 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 QSOX2Q6ZRP7 698 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 USP30Q70CQ3 517 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 GPRIN1Q7Z2K8 1008 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 CTU1Q7Z7A3 348 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 SYT14Q8NB59 555 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 BVESQ8NE79 360 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 ADAMTS18Q8TE60 1221 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 SCRN2Q96FV2 425 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 IL4I1Q96RQ9 567 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 LMF1Q96S06 567 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 PRRX2Q99811 253 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 DPAGT1Q9H3H5 408 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 MYOZ1Q9NP98 299 aaPredicted RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 H2AFY2Q9P0M6 372 aaPredicted RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 RPH3ALQ9UNE2 315 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 TP53TG5Q9Y2B4 290 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 RPL36Q9Y3U8 105 aaKnown RBP7.07□□□□□ -1.28
SOX6-208ENST00000527619 RAI2Q9Y5P3 530 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 RLFQ13129 1914 aa7.07□□□□□ -1.28
SOX6-208ENST00000527619 OTOFQ9HC10 1997 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 AIPO00170 330 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 TLR4O00206 839 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 PIRO00625 290 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 PDCD5O14737 125 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 PHYHO14832 338 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 HSPA12AO43301 675 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 FRS3O43559 492 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 TLR5O60602 858 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 SELENOFO60613 162 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 ATG12O94817 140 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 SOX30O94993 753 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 C22orf31O95567 290 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 PAK4O96013 591 aaPredicted RBP7.06□□□□□ -1.28
SOX6-208ENST00000527619 SLC2A1P11166 492 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 BPIP17213 487 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 RAB3BP20337 219 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 GALP22466 123 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 ATP5A1P25705 553 aaKnown RBP7.06□□□□□ -1.28
SOX6-208ENST00000527619 SMSP52788 366 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 CRYBA2P53672 197 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 RPS25P62851 125 aaKnown RBP7.06□□□□□ -1.28
SOX6-208ENST00000527619 TRA2BP62995 288 aaKnown RBP7.06□□□□□ -1.28
SOX6-208ENST00000527619 RBBP4Q09028 425 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 GPR17Q13304 367 aa7.06□□□□□ -1.28
SOX6-208ENST00000527619 DDX39BQ13838 428 aaKnown RBP7.06□□□□□ -1.28
SOX6-208ENST00000527619 GRIN2CQ14957 1233 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms