RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 DSN1Q9H410 356 aa12.85□□□□□ -0.35
CPSF1-201ENST00000526271 RNF122Q9H9V4 155 aa12.85□□□□□ -0.35
CPSF1-201ENST00000526271 FOLH1BQ9HBA9 442 aa12.85□□□□□ -0.35
CPSF1-201ENST00000526271 ZNF337Q9Y3M9 751 aa12.85□□□□□ -0.35
CPSF1-201ENST00000526271 TNPO3Q9Y5L0 923 aaKnown RBP12.85□□□□□ -0.35
CPSF1-201ENST00000526271 SHISA8B8ZZ34 492 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 ARHGEF9O43307 516 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 FADS1O60427 444 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 ERLIN1O75477 346 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 AQP8O94778 261 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 SOX30O94993 753 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 IL3P08700 152 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 HSD17B3P37058 310 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 SLC6A8P48029 635 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 PTH2RP49190 550 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 HTR6P50406 440 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 BCL2A1Q16548 175 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 TMEM44Q2T9K0 475 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 CXXC5Q7LFL8 322 aaKnown RBP12.84□□□□□ -0.35
CPSF1-201ENST00000526271 UBQLNLQ8IYU4 475 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 CNEP1R1Q8N9A8 125 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 FNDC9Q8TBE3 224 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 UBLCP1Q8WVY7 318 aaPredicted RBP12.84□□□□□ -0.35
CPSF1-201ENST00000526271 ZC3HAV1LQ96H79 300 aaKnown RBP12.84□□□□□ -0.35
CPSF1-201ENST00000526271 CCL19Q99731 98 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 GSX2Q9BZM3 304 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 VPS11Q9H270 941 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 NDRG3Q9UGV2 375 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 EIF3LQ9Y262 564 aaKnown RBP12.84□□□□□ -0.35
CPSF1-201ENST00000526271 CFL2Q9Y281 166 aa12.84□□□□□ -0.35
CPSF1-201ENST00000526271 ALPK2Q86TB3 2170 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 GOLGA6L10A6NI86 522 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 SLC22A20A6NK97 555 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 CASKO14936 926 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 OR4F21O95013 312 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 CNOT4O95628 575 aaKnown RBP12.83□□□□□ -0.36
CPSF1-201ENST00000526271 CRHP06850 196 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 PAX1P15863 534 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 ALDH9A1P49189 494 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 NR1H2P55055 460 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 BEND6Q5SZJ8 279 aaPredicted RBP12.83□□□□□ -0.36
CPSF1-201ENST00000526271 APOOLQ6UXV4 268 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 LARP4Q71RC2 724 aaKnown RBP eCLIP12.83□□□□□ -0.36
CPSF1-201ENST00000526271 TAOK1Q7L7X3 1001 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 MILR1Q7Z6M3 343 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 GGNQ86UU5 652 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 SELENOMQ8WWX9 145 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 PIGTQ969N2 578 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 APIPQ96GX9 242 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 C1QTNF3Q9BXJ4 246 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 MED11Q9P086 117 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 PRODH2Q9UF12 536 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 UTS2RQ9UKP6 389 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 SVEP1Q4LDE5 3571 aa12.83□□□□□ -0.36
CPSF1-201ENST00000526271 OR2M5A3KFT3 312 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 A8MT66 165 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 MANBAO00462 879 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 EMC8O43402 210 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 SCO2O43819 266 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 PSMG1O95456 288 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 H2AFXP16104 143 aaPredicted RBP12.82□□□□□ -0.36
CPSF1-201ENST00000526271 TYK2P29597 1187 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 EVI2BP34910 448 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 SERPINB8P50452 374 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 PNLIPRP2P54317 469 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 DIO3P55073 304 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 AAGABQ6PD74 315 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 PAGE2Q7Z2X7 111 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 CCDC91Q7Z6B0 441 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 UHMK1Q8TAS1 419 aaKnown RBP12.82□□□□□ -0.36
CPSF1-201ENST00000526271 ATP6V1E2Q96A05 226 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 EXOSC8Q96B26 276 aaKnown RBP12.82□□□□□ -0.36
CPSF1-201ENST00000526271 TMCO6Q96DC7 493 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 FAM111AQ96PZ2 611 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 TMEM204Q9BSN7 226 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 MED18Q9BUE0 208 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 PINK1Q9BXM7 581 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 ACPTQ9BZG2 426 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 ACBD3Q9H3P7 528 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 ELOVL6Q9H5J4 265 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 BRF2Q9HAW0 419 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 ZNF701Q9NV72 531 aaPredicted RBP12.82□□□□□ -0.36
CPSF1-201ENST00000526271 AHSPQ9NZD4 102 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 DKKL1Q9UK85 242 aa12.82□□□□□ -0.36
CPSF1-201ENST00000526271 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 NBEAL1Q6ZS30 2694 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 SEC14L5O43304 696 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 PLOD3O60568 738 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 TNFRSF21O75509 655 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 IGKV1D-16P01601 117 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 NUDT17P0C025 328 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 CD8BP10966 210 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 POU2F1P14859 743 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 GCAP28676 217 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 ARL1P40616 181 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 DSCR4P56555 118 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-201ENST00000526271 ZNF844Q08AG5 666 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 IFT88Q13099 833 aa12.81□□□□□ -0.36
CPSF1-201ENST00000526271 PON3Q15166 354 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms