RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 PHC2Q8IXK0 858 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 TYMSOSQ8TAI1 123 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 SGF29Q96ES7 293 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 CEP170P1Q96L14 293 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 TEKT3Q9BXF9 490 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 TRIM4Q9C037 500 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 RPF1Q9H9Y2 349 aaKnown RBP4.16□□□□□ -1.74
COPB1-204ENST00000526191 POLD4Q9HCU8 107 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 TCHHQ07283 1943 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 PIEZO2Q9H5I5 2752 aa4.16□□□□□ -1.74
COPB1-204ENST00000526191 DOPEY2Q9Y3R5 2298 aa4.15□□□□□ -1.74
COPB1-204ENST00000526191 PCDH15Q96QU1 1955 aa4.15□□□□□ -1.74
COPB1-204ENST00000526191 J3QKU1 62 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 STX6O43752 255 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 GPRIN2O60269 458 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 PRAMEF12O95522 483 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 TDP2O95551 362 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 GOT1P17174 413 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 EDNRAP25101 427 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 HOXA9P31269 272 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 ATP4BP51164 291 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 ATXN3P54252 364 aaPredicted RBP4.15□□□□□ -1.75
COPB1-204ENST00000526191 OSTNP61366 133 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 FKBP3Q00688 224 aaKnown RBP4.15□□□□□ -1.75
COPB1-204ENST00000526191 POU5F1Q01860 360 aaKnown RBP4.15□□□□□ -1.75
COPB1-204ENST00000526191 DMC1Q14565 340 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 EMC2Q15006 297 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 PPA1Q15181 289 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 IQCCQ4KMZ1 466 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 PODNL1Q6PEZ8 512 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 NHLRC1Q6VVB1 395 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 NIPA1Q7RTP0 329 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 HOOK3Q86VS8 718 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 RALGPS2Q86X27 583 aaPredicted RBP4.15□□□□□ -1.75
COPB1-204ENST00000526191 ZC3H3Q8IXZ2 948 aaKnown RBP4.15□□□□□ -1.75
COPB1-204ENST00000526191 ELMOD1Q8N336 334 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 HDDC3Q8N4P3 179 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 TEX26Q8N6G2 289 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 OR7G3Q8NG95 312 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 EXOC6Q8TAG9 804 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.15□□□□□ -1.75
COPB1-204ENST00000526191 LURAP1Q96LR2 239 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 ATF6BQ99941 703 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 LZTS2Q9BRK4 669 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 NUSAP1Q9BXS6 441 aaKnown RBP4.15□□□□□ -1.75
COPB1-204ENST00000526191 C8orf33Q9H7E9 229 aaPredicted RBP4.15□□□□□ -1.75
COPB1-204ENST00000526191 PDRG1Q9NUG6 133 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 MTRRQ9UBK8 725 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 SATB2Q9UPW6 733 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 KALRNO60229 2985 aa4.15□□□□□ -1.75
COPB1-204ENST00000526191 COL5A1P20908 1838 aaPredicted RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 TRABD2BA6NFA1 517 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 LRRIQ4A6NIV6 560 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 NKX6-3A6NJ46 265 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 CHADO15335 359 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 APBB3O95704 486 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 HPP00738 406 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 MT-ND2P03891 347 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 GABRR2P28476 465 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 NMT1P30419 496 aaKnown RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 SRD5A2P31213 254 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 FRKP42685 505 aaPredicted RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 TNNT3P45378 269 aaPredicted RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 NDST2P52849 883 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 RPP38P78345 283 aaKnown RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 NCBP1Q09161 790 aaKnown RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 ANKRD20A4Q4UJ75 823 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 ANKRD20A8PQ5CZ79 823 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 ANKRD20A2Q5SQ80 823 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 ANKRD20A1Q5TYW2 823 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 ANKRD20A3Q5VUR7 823 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 C11orf88Q6PI97 169 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 CD300LGQ6UXG3 332 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 MACC1Q6ZN28 852 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 TRMT11Q7Z4G4 463 aaKnown RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 ANKRD46Q86W74 232 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 RNF130Q86XS8 419 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 SLC22A15Q8IZD6 547 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 CNNM3Q8NE01 707 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 TSTD1Q8NFU3 115 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 FIBINQ8TAL6 211 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 SAP25Q8TEE9 199 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 SETD7Q8WTS6 366 aaKnown RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 IL12RB2Q99665 862 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 PRMT1Q99873 361 aaKnown RBP4.14□□□□□ -1.75
COPB1-204ENST00000526191 CCDC28BQ9BUN5 200 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 SLC39A8Q9C0K1 460 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 DPEP2Q9H4A9 486 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 SRD5A3Q9H8P0 318 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 HPS4Q9NQG7 708 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 SEPT10Q9P0V9 454 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 VPS54Q9P1Q0 977 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 TSPAN16Q9UKR8 245 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 POMT2Q9UKY4 750 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 CCL26Q9Y258 94 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 ANAPC1Q9H1A4 1944 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 COL12A1Q99715 3063 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 FER1L5A0AVI2 2057 aa4.14□□□□□ -1.75
COPB1-204ENST00000526191 CFAP46Q8IYW2 2715 aa4.13□□□□□ -1.75
COPB1-204ENST00000526191 hCG_38984A0A1B0GV85 526 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms