RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 ZNF562Q6V9R5 426 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 PRSS48Q7RTY5 328 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 NET1Q7Z628 596 aaPredicted RBP2.91□□□□□ -1.94
PCM1-220ENST00000523896 HPS6Q86YV9 775 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 GPATCH11Q8N954 259 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 OR52J3Q8NH60 311 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 TYMSOSQ8TAI1 123 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 ZNF671Q8TAW3 534 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 C11orf24Q96F05 449 aaPredicted RBP2.91□□□□□ -1.94
PCM1-220ENST00000523896 RANBP9Q96S59 729 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 KRT23Q9C075 422 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 ROPN1Q9HAT0 212 aaPredicted RBP2.91□□□□□ -1.94
PCM1-220ENST00000523896 FAM114A2Q9NRY5 505 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 DCAF13Q9NV06 445 aaKnown RBP2.91□□□□□ -1.94
PCM1-220ENST00000523896 IMPAD1Q9NX62 359 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 NTNG1Q9Y2I2 539 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 MTF2Q9Y483 593 aaPredicted RBP2.91□□□□□ -1.94
PCM1-220ENST00000523896 CLCA3PQ9Y6N3 262 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 ABCA10Q8WWZ4 1543 aa2.91□□□□□ -1.94
PCM1-220ENST00000523896 MYO3AQ8NEV4 1616 aa2.9□□□□□ -1.94
PCM1-220ENST00000523896 STRCP1A6NGW2 1772 aa2.9□□□□□ -1.94
PCM1-220ENST00000523896 PDE4DIPQ5VU43 2346 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 RNF222A6NCQ9 220 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 ZSCAN5CA6NGD5 496 aaPredicted RBP2.9□□□□□ -1.95
PCM1-220ENST00000523896 C11orf98E9PRG8 122 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 H3BTX0 84 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 SAP18O00422 153 aaKnown RBP2.9□□□□□ -1.95
PCM1-220ENST00000523896 IMPA2O14732 288 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 ALOX15BO15296 676 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 SDC3O75056 442 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 STAM2O75886 525 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 PRAMEF12O95522 483 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 GHRP10912 638 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 FUT1P19526 365 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 AZU1P20160 251 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 DNAJB1P25685 340 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 RPA1P27694 616 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 CHRNA3P32297 505 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 HMGCLP35914 325 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 POU3F4P49335 361 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 STK19P49842 368 aaPredicted RBP2.9□□□□□ -1.95
PCM1-220ENST00000523896 IST1P53990 364 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 PPIAP62937 165 aaKnown RBP2.9□□□□□ -1.95
PCM1-220ENST00000523896 MRPS6P82932 125 aaKnown RBP2.9□□□□□ -1.95
PCM1-220ENST00000523896 SPP2Q13103 211 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 RUNX3Q13761 415 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 TIMM50Q3ZCQ8 353 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 SLC22A6Q4U2R8 563 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 ATAD3CQ5T2N8 411 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 SYVN1Q86TM6 617 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 ADCK1Q86TW2 530 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 ERICH1Q86X53 443 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 CCDC36Q8IYA8 594 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 CERS5Q8N5B7 392 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 BCORP1Q8N888 145 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 VN1R17PQ8TDU5 208 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 FCGR1BQ92637 280 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 CARD6Q9BX69 1037 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 NGBQ9NPG2 151 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 TIGARQ9NQ88 270 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.9□□□□□ -1.95
PCM1-220ENST00000523896 FAM120CQ9NX05 1096 aaKnown RBP2.9□□□□□ -1.95
PCM1-220ENST00000523896 KLRF1Q9NZS2 232 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 P2RX2Q9UBL9 471 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 GHRLQ9UBU3 117 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 ZNF107Q9UII5 783 aaPredicted RBP2.9□□□□□ -1.95
PCM1-220ENST00000523896 XIRP1Q702N8 1843 aaKnown RBP2.9□□□□□ -1.95
PCM1-220ENST00000523896 C9orf84Q5VXU9 1444 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 ATP10AO60312 1499 aa2.9□□□□□ -1.95
PCM1-220ENST00000523896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.89□□□□□ -1.95
PCM1-220ENST00000523896 TOP2AP11388 1531 aaKnown RBP2.89□□□□□ -1.95
PCM1-220ENST00000523896 SHPRHQ149N8 1683 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 ADGBQ8N7X0 1667 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 PCNTO95613 3336 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 TRBV7-9A0A0J9YWB2 115 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 FAM230AA0A1W2PPH8 454 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 A0A1W2PQ72 361 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 TTC26A0AVF1 554 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 PDXKO00764 312 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 GJB5O95377 273 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 CCND2P30279 289 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 ARHGDIBP52566 201 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 METAP1P53582 386 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 BPIFB3P59826 476 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 GMFBP60983 142 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 NPATQ14207 1427 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 CEBPEQ15744 281 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 CCDC92Q53HC0 331 aaPredicted RBP2.89□□□□□ -1.95
PCM1-220ENST00000523896 LDLRAP1Q5SW96 308 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 BEND6Q5SZJ8 279 aaPredicted RBP2.89□□□□□ -1.95
PCM1-220ENST00000523896 C12orf60Q5U649 245 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 ZCCHC12Q6PEW1 402 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 HACD2Q6Y1H2 254 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 GCNT7Q6ZNI0 430 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 FGD6Q6ZV73 1430 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 NAXDQ8IW45 347 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 LINC00612Q8N6U2 182 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 NFAM1Q8NET5 270 aaPredicted RBP2.89□□□□□ -1.95
PCM1-220ENST00000523896 RHOXF1Q8NHV9 184 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 RFESDQ8TAC1 157 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms