RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 YIPF6Q96EC8 236 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 PDE7BQ9NP56 450 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 CLN6Q9NWW5 311 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 RNF215Q9Y6U7 377 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 TGFBR3LH3BV60 316 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 AK1P00568 194 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 IFNA8P32881 189 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 FNTBP49356 437 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 ST13P50502 369 aaKnown RBP24.09■■□□□ 1.45
COL13A1-214ENST00000522165 AFF3P51826 1226 aaKnown RBP24.09■■□□□ 1.45
COL13A1-214ENST00000522165 SNRPGP62308 76 aaKnown RBP24.09■■□□□ 1.45
COL13A1-214ENST00000522165 MAT1AQ00266 395 aaKnown RBP24.09■■□□□ 1.45
COL13A1-214ENST00000522165 SLC13A2Q13183 592 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 SRSF5Q13243 272 aaKnown RBP24.09■■□□□ 1.45
COL13A1-214ENST00000522165 OR6C4Q8NGE1 309 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 OR52R1Q8NGF1 315 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 HOXB13Q92826 284 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-214ENST00000522165 ZDHHC12Q96GR4 267 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 GUCD1Q96NT3 240 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 MCHR1Q99705 422 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 DUSP15Q9H1R2 295 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-214ENST00000522165 FBXO34Q9NWN3 711 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 MRPS33Q9Y291 106 aaKnown RBP24.09■■□□□ 1.45
COL13A1-214ENST00000522165 SPTBP11277 2137 aa24.09■■□□□ 1.45
COL13A1-214ENST00000522165 BLACEA4D250 179 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 KIAA0513O60268 411 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 CTNSO60931 367 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 LCKP06239 509 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 CDK4P11802 303 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 TNNI3P19429 210 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 S1PR1P21453 382 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 ALDH4A1P30038 563 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 TBCEQ15813 527 aaPredicted RBP24.08■■□□□ 1.45
COL13A1-214ENST00000522165 MAPK14Q16539 360 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 CTF1Q16619 201 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 EIPR1Q53HC9 387 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 PLEKHM3Q6ZWE6 761 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 ZNF595Q8IYB9 648 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 ADAMTS18Q8TE60 1221 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 FCGR1BQ92637 280 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 NTNG1Q9Y2I2 539 aa24.08■■□□□ 1.45
COL13A1-214ENST00000522165 HRO43593 1189 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 COQ9O75208 318 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 BCAS1O75363 584 aaPredicted RBP24.07■■□□□ 1.44
COL13A1-214ENST00000522165 DBIP07108 87 aaKnown RBP24.07■■□□□ 1.44
COL13A1-214ENST00000522165 GSTM3P21266 225 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 GABRA3P34903 492 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 IGLV3-21P80748 117 aaPredicted RBP24.07■■□□□ 1.44
COL13A1-214ENST00000522165 DMWDQ09019 674 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 TCTE1Q5JU00 501 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 GALNT12Q8IXK2 581 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 B3GNT7Q8NFL0 401 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 CD180Q99467 661 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 IRAK4Q9NWZ3 460 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 LRIT1Q9P2V4 623 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 SIT1Q9Y3P8 196 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 PCDH15Q96QU1 1955 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 NKX2-2O95096 273 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 STSP08842 583 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 ZNF182P17025 639 aaPredicted RBP24.07■■□□□ 1.44
COL13A1-214ENST00000522165 POU6F2P78424 691 aaPredicted RBP24.07■■□□□ 1.44
COL13A1-214ENST00000522165 ZNF155Q12901 538 aaPredicted RBP24.07■■□□□ 1.44
COL13A1-214ENST00000522165 AQP6Q13520 282 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 SYT16Q17RD7 645 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 WDR45BQ5MNZ6 344 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 CASP12Q6UXS9 341 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 TRUB1Q8WWH5 349 aaKnown RBP24.07■■□□□ 1.44
COL13A1-214ENST00000522165 IL4I1Q96RQ9 567 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 BCL7BQ9BQE9 202 aa24.07■■□□□ 1.44
COL13A1-214ENST00000522165 GXYLT2A0PJZ3 443 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 GABARAPO95166 117 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 OR5F1O95221 314 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 NR4A1P22736 598 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 IFNGR2P38484 337 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 ST3GAL4Q11206 333 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 STX4Q12846 297 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 ZNF730Q6ZMV8 503 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 STX19Q8N4C7 294 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 SPRTNQ9H040 489 aaPredicted RBP24.06■■□□□ 1.44
COL13A1-214ENST00000522165 PRTFDC1Q9NRG1 225 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 KLHL3Q9UH77 587 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 KCNE5Q9UJ90 142 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 TP53BP1Q12888 1972 aaPredicted RBP24.06■■□□□ 1.44
COL13A1-214ENST00000522165 FITM1A5D6W6 292 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 EFCAB10A6NFE3 127 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 CDC123O75794 336 aaPredicted RBP24.06■■□□□ 1.44
COL13A1-214ENST00000522165 THY1P04216 161 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 ZNF136P52737 540 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 ERV3-1Q14264 604 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 TMEM201Q5SNT2 666 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 FIGNL1Q6PIW4 674 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 PRICKLE2Q7Z3G6 844 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 GNPDA2Q8TDQ7 276 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 PMM1Q92871 262 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 RIT1Q92963 219 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 MMABQ96EY8 250 aaPredicted RBP24.06■■□□□ 1.44
COL13A1-214ENST00000522165 SLC41A3Q96GZ6 507 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 RBM18Q96H35 190 aaKnown RBP24.06■■□□□ 1.44
COL13A1-214ENST00000522165 ALOXE3Q9BYJ1 711 aa24.06■■□□□ 1.44
COL13A1-214ENST00000522165 CNOT2Q9NZN8 540 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms