RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 RGS4P49798 205 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 TNFRSF17Q02223 184 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 MGAT2Q10469 447 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 DHX34Q14147 1143 aaKnown RBP7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 MST1LQ2TV78 715 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 FBLN7Q53RD9 439 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 ZBTB37Q5TC79 503 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 HLA-DQA1Q5Y7H0 255 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 USP43Q70EL4 1123 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 GPATCH11Q8N954 259 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 FADS6Q8N9I5 356 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 LRRC57Q8N9N7 239 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 C7orf57Q8NEG2 295 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 NUP43Q8NFH3 380 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 ZNF473Q8WTR7 871 aaKnown RBP7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 BTBD9Q96Q07 612 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 ANP32EQ9BTT0 268 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 HDHD5Q9BXW7 423 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 MS4A8Q9BY19 250 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 BPESC1Q9GZL8 116 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 NGBQ9NPG2 151 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 ABHD10Q9NUJ1 306 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 DNAJC11Q9NVH1 559 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 DKKL1Q9UK85 242 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 MAD1L1Q9Y6D9 718 aa7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.82□□□□□ -1.16
TRAPPC9-212ENST00000521944 WNK2Q9Y3S1 2297 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ZNF814B7Z6K7 855 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 TRIM77I1YAP6 450 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 NDUFS8O00217 210 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ALDOAP04075 364 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 EPORP19235 508 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 GRK2P25098 689 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ZFP36P26651 326 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 AGTR1P30556 359 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 DEKP35659 375 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 CASP2P42575 452 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 PDLIM4P50479 330 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 CTBP2P56545 445 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 DSCR4P56555 118 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 EEFSECP57772 596 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 TAGLNQ01995 201 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 MAP4K2Q12851 820 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 XP32Q5T750 250 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 MRM1Q6IN84 353 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 TFAP2EQ6VUC0 442 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 Q6ZSR9 355 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 NUFIP2Q7Z417 695 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 GPR180Q86V85 440 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 KRT78Q8N1N4 520 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 RNF175Q8N4F7 328 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 C1orf54Q8WWF1 131 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 WDR34Q96EX3 536 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ADGRG7Q96K78 797 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 SORCS2Q96PQ0 1159 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 PKP2Q99959 881 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 PIMREGQ9BSJ6 248 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 RBM4Q9BWF3 364 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ZNF717Q9BY31 904 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ITPAQ9BY32 194 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 RTN4RQ9BZR6 473 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ROGDIQ9GZN7 287 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 PITHD1Q9GZP4 211 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 NAT10Q9H0A0 1025 aaKnown RBP7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 PAK5Q9P286 719 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 XPR1Q9UBH6 696 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 PCDHB10Q9UN67 800 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 ASB4Q9Y574 426 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 BIRC6Q9NR09 4857 aa7.81□□□□□ -1.16
TRAPPC9-212ENST00000521944 PABPN1LA6NDY0 278 aaKnown RBP7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 SDR42E2A6NKP2 422 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 H3BML4 177 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 PGRMC2O15173 223 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 TMPRSS11DO60235 418 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 NME6O75414 186 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 WDR47O94967 919 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 ADAP00813 363 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 ENO2P09104 434 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 KRT15P19012 456 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 IL2P60568 153 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 TGM3Q08188 693 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 CDK5R2Q13319 367 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 SNX1Q13596 522 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 THOC5Q13769 683 aaKnown RBP7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 TMEM44Q2T9K0 475 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 TSNAXIP1Q2TAA8 658 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 AP5B1Q2VPB7 878 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 IQCCQ4KMZ1 466 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 DEPDC1Q5TB30 811 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 RAET1LQ5VY80 246 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 OR4C11Q6IEV9 310 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 LRFN4Q6PJG9 635 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 SVOPLQ8N434 492 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 ZDHHC22Q8N966 263 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 LINC01356Q8N9X3 169 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 OR2M3Q8NG83 312 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 ANKRD7Q92527 254 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 TMBIM1Q969X1 311 aa7.8□□□□□ -1.16
TRAPPC9-212ENST00000521944 MRPL24Q96A35 216 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms