RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 UBQLNLQ8IYU4 475 aa13.73□□□□□ -0.21
CSMD1-207ENST00000520451 DSN1Q9H410 356 aa13.73□□□□□ -0.21
CSMD1-207ENST00000520451 MIEF1Q9NQG6 463 aa13.73□□□□□ -0.21
CSMD1-207ENST00000520451 SIRT5Q9NXA8 310 aa13.73□□□□□ -0.21
CSMD1-207ENST00000520451 TBK1Q9UHD2 729 aa13.73□□□□□ -0.21
CSMD1-207ENST00000520451 FLNAP21333 2647 aaKnown RBP13.73□□□□□ -0.21
CSMD1-207ENST00000520451 A0A087WV62 115 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 UBFD1O14562 309 aaKnown RBP13.72□□□□□ -0.21
CSMD1-207ENST00000520451 TNFSF13O75888 250 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 MYL2P10916 166 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 NTSP30990 170 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 B3GALT5-AS1P59052 145 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 STX5Q13190 355 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 BCL2A1Q16548 175 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 KRTAP21-3Q3LHN1 58 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 CYP27C1Q4G0S4 372 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 RAET1LQ5VY80 246 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 FAM71E1Q6IPT2 247 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 IFT20Q8IY31 132 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 FADS6Q8N9I5 356 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 OR2M3Q8NG83 312 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 DLL4Q9NR61 685 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 DDX18Q9NVP1 670 aaKnown RBP13.72□□□□□ -0.21
CSMD1-207ENST00000520451 FLRT3Q9NZU0 649 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 EMCNQ9ULC0 261 aa13.72□□□□□ -0.21
CSMD1-207ENST00000520451 C19orf53Q9UNZ5 99 aaPredicted RBP13.72□□□□□ -0.21
CSMD1-207ENST00000520451 POLR3HQ9Y535 204 aaPredicted RBP13.72□□□□□ -0.21
CSMD1-207ENST00000520451 SLC22A20A6NK97 555 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 A8MXE2 369 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 G3V2L1 256 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 CASKO14936 926 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 FADS1O60427 444 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 CRCPO75575 148 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 SMNDC1O75940 238 aaKnown RBP eCLIP13.71□□□□□ -0.21
CSMD1-207ENST00000520451 SLITRK5O94991 958 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 FAM153BP0C7A2 387 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 PEPDP12955 493 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 HK1P19367 917 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 SLC29A2Q14542 456 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 DECR1Q16698 335 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 FAM153CQ494X1 144 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 OR2A2Q6IF42 318 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 ZYG11AQ6WRX3 759 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 MEIOBQ8N635 442 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 CNEP1R1Q8N9A8 125 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 MZB1Q8WU39 189 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 CCDC126Q96EE4 140 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 GLIPR2Q9H4G4 154 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 Q9N2J8 555 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 MYNNQ9NPC7 610 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 SDHAF3Q9NRP4 125 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 MED11Q9P086 117 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 NDRG3Q9UGV2 375 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 DCDC2Q9UHG0 476 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 GRID1Q9ULK0 1009 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 ABCG2Q9UNQ0 655 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 EIF3LQ9Y262 564 aaKnown RBP13.71□□□□□ -0.21
CSMD1-207ENST00000520451 TESMINQ9Y4I5 508 aa13.71□□□□□ -0.21
CSMD1-207ENST00000520451 MED12LQ86YW9 2145 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 A0A1W2PPR1 153 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 UPK1AO00322 258 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 MSTNO14793 375 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 PSMG1O95456 288 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 CRHP06850 196 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 RFX3P48380 749 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 GANABQ14697 944 aaKnown RBP13.7□□□□□ -0.22
CSMD1-207ENST00000520451 ZNHIT3Q15649 155 aaPredicted RBP13.7□□□□□ -0.22
CSMD1-207ENST00000520451 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 VWA1Q6PCB0 445 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 FRMD7Q6ZUT3 714 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 OR2L13Q8N349 312 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 WFDC11Q8NEX6 87 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 FAM76AQ8TAV0 307 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.7□□□□□ -0.22
CSMD1-207ENST00000520451 SMPDL3BQ92485 455 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 STARD4Q96DR4 205 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 AMDHD1Q96NU7 426 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 GSX1Q9H4S2 264 aaPredicted RBP13.7□□□□□ -0.22
CSMD1-207ENST00000520451 NEUROD4Q9HD90 331 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 FAM120CQ9NX05 1096 aaKnown RBP13.7□□□□□ -0.22
CSMD1-207ENST00000520451 TAS2R7Q9NYW3 318 aa13.7□□□□□ -0.22
CSMD1-207ENST00000520451 A0A1W2PPM1 405 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 H0YC42 278 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 H3BQF6 201 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 SEC14L5O43304 696 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 GLRA3O75311 464 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 RSL1D1O76021 490 aaKnown RBP13.69□□□□□ -0.22
CSMD1-207ENST00000520451 IL33O95760 270 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 PROCP04070 461 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 FOSL1P15407 271 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 CD53P19397 219 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 CLK3P49761 638 aaKnown RBP13.69□□□□□ -0.22
CSMD1-207ENST00000520451 TPD52P55327 224 aaPredicted RBP13.69□□□□□ -0.22
CSMD1-207ENST00000520451 CLDN15P56746 228 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 EEFSECP57772 596 aaKnown RBP13.69□□□□□ -0.22
CSMD1-207ENST00000520451 NAA20P61599 178 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 SIRPAP78324 504 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 FAM27E3Q08E93 113 aa13.69□□□□□ -0.22
CSMD1-207ENST00000520451 NOXRED1Q6NXP6 359 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms