RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SUN5Q8TC36 379 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CD200R1Q8TD46 325 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CALML6Q8TD86 181 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 STK35Q8TDR2 534 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF75CPQ92670 426 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 PYCR2Q96C36 320 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 FBXL8Q96CD0 374 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 KCNC2Q96PR1 638 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 OR4K3Q96R72 315 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 NDNQ99608 321 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 GPR21Q99679 349 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 G6PC3Q9BUM1 346 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 TRAF4Q9BUZ4 470 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 HDHD5Q9BXW7 423 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CAPS2Q9BXY5 557 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 RAB17Q9H0T7 212 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 OPN3Q9H1Y3 402 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ACSS3Q9H6R3 686 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 METTL7AQ9H8H3 244 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 EML4Q9HC35 981 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 TEX10Q9NXF1 929 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 IL20Q9NYY1 176 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 PAK5Q9P286 719 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 MCM8Q9UJA3 840 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 TRMT6Q9UJA5 497 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 PACSIN2Q9UNF0 486 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 EXO1Q9UQ84 846 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 GPR52Q9Y2T5 361 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 EMC9Q9Y3B6 208 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF175Q9Y473 711 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 WIF1Q9Y5W5 379 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 KCNE2Q9Y6J6 123 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 VWFP04275 2813 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 FAM157AC9JC47 383 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 GOLGA8KD6RF30 607 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 M0QX08 132 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 NDUFS8O00217 210 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 POLR3GO15318 223 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 RAD51CO43502 376 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 KIAA0513O60268 411 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 B3GALNT1O75752 331 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SCELO95171 688 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 LRATO95237 230 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 TGM6O95932 706 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 PLAUP00749 431 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 FGGP02679 453 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 IGHV4-31P0DP07 118 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 PEPDP12955 493 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 ALOX15P16050 662 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 PSMB1P20618 241 aaKnown RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 IL11P20809 199 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 PCMT1P22061 227 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 ENPP1P22413 925 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CERS1P27544 350 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SRD5A2P31213 254 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 TLX1P31314 330 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 HNRNPH1P31943 449 aaKnown RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 GRIA1P42261 906 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 HTR3AP46098 478 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 HNMTP50135 292 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 PLA2G16P53816 162 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SLC37A1P57057 533 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 FBXW4P57775 412 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SESN2P58004 480 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 RPS13P62277 151 aaKnown RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 ACTG1P63261 375 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CDK16Q00536 496 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SRSF2Q01130 221 aaKnown RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 DEFA6Q01524 100 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SLC7A5Q01650 507 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 KLF1Q13351 362 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 THOC5Q13769 683 aaKnown RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 RAB35Q15286 201 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 GUSBP1Q15486 140 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF124Q15973 351 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 PGGHGQ32M88 737 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 NCMAPQ5T1S8 102 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SEL1L2Q5TEA6 688 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF470Q6ECI4 717 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 UGT2A3Q6UWM9 527 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SBSNQ6UWP8 590 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 LRIG3Q6UXM1 1119 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 MBOAT1Q6ZNC8 495 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CENPUQ71F23 418 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 KLHL7Q8IXQ5 586 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CELF2-AS1Q8N7Q2 184 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 STEAP2Q8NFT2 490 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 IFT81Q8WYA0 676 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CCT6BQ92526 530 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 FAM168AQ92567 244 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 TANKQ92844 425 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 GFM2Q969S9 779 aaKnown RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 MFSD3Q96ES6 412 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 RADILQ96JH8 1075 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 TSNARE1Q96NA8 513 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SFXN2Q96NB2 322 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CSF3RQ99062 836 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 TBCDQ9BTW9 1192 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms