RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 ZNF791Q3KP31 576 aaPredicted RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 TTMPQ5BVD1 217 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 CPTPQ5TA50 214 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 NUP210LQ5VU65 1888 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ZNF324BQ6AW86 544 aaPredicted RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 TMEM107Q6UX40 140 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 GK5Q6ZS86 529 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ZNF551Q7Z340 670 aaPredicted RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 SPPL2CQ8IUH8 684 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 DND1Q8IYX4 353 aaKnown RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 PRR22Q8IZ63 422 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ZNF441Q8N8Z8 693 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 SIMC1Q8NDZ2 872 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 OR2M7Q8NG81 312 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 OR7G2Q8NG99 324 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 RAB3IL1Q8TBN0 382 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ZNF675Q8TD23 568 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 DYDC1Q8WWB3 177 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ZNF75CPQ92670 426 aaPredicted RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 DIO2Q92813 273 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ADIPOR1Q96A54 375 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 CIDECQ96AQ7 238 aaPredicted RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 CTHRC1Q96CG8 243 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ERP27Q96DN0 273 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 SPACA9Q96E40 222 aaPredicted RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ELP4Q96EB1 424 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 HSPBAP1Q96EW2 488 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ZBED6CLQ96FA7 236 aaPredicted RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 FCRL1Q96LA6 429 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 JSRP1Q96MG2 331 aaPredicted RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 AMDHD1Q96NU7 426 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 BARD1Q99728 777 aaKnown RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 SLX1AQ9BQ83 275 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 FAM173AQ9BQD7 235 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ITPAQ9BY32 194 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 NXF5Q9H1B4 397 aaKnown RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 GLIPR2Q9H4G4 154 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ANKRA2Q9H9E1 313 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 C3orf14Q9HBI5 128 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 ATAD3AQ9NVI7 634 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 DDX18Q9NVP1 670 aaKnown RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 TAS2R9Q9NYW1 312 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 CNIH4Q9P003 139 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 EXO1Q9UQ84 846 aaKnown RBP5.61□□□□□ -1.51
MRPS28-203ENST00000518371 OSGIN2Q9Y236 505 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 DTX4Q9Y2E6 619 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 OR10H1Q9Y4A9 318 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 CFAP46Q8IYW2 2715 aa5.61□□□□□ -1.51
MRPS28-203ENST00000518371 A0A087WV62 115 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 TRGV8A0A0C4DH27 118 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 GOLGA8QA0A0J9YX86 632 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 A0A1W2PRB8 838 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 GOLGA8OA6NCC3 632 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 FAM166BA8MTA8 275 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 GOLGA8NF8WBI6 632 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 ACOT7O00154 380 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 UPK1AO00322 258 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PLOD2O00469 737 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 SCAMP2O15127 329 aaKnown RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 ACOX3O15254 700 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 HDAC3O15379 428 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 CFLARO15519 480 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 HS6ST1O60243 411 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 CDC40O60508 579 aaKnown RBP eCLIP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 SNNO75324 88 aaPredicted RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 NME6O75414 186 aaPredicted RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 ERN1O75460 977 aaKnown RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 WISP2O76076 250 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PDE9AO76083 593 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 ABCB1P08183 1280 aaPredicted RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 CCL3P10147 92 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 LAMP1P11279 417 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 NAGAP17050 411 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 EFNA1P20827 205 aaPredicted RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PRPS1L1P21108 318 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 MC3RP41968 323 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 DNASE1L1P49184 302 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 CASP6P55212 293 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 CLDN8P56748 225 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 FBXW4P57775 412 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 KCNK10P57789 538 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PPIAP62937 165 aaKnown RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PPP2R2AP63151 447 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PLCXD2Q0VAA5 305 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 ZNF155Q12901 538 aaPredicted RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 HSPB3Q12988 150 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 DUSP8Q13202 625 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PTGR1Q14914 329 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 RPS6KA2Q15349 733 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 ZNHIT3Q15649 155 aaPredicted RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 NTRK2Q16620 822 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PGS1Q32NB8 556 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 LSM12Q3MHD2 195 aaKnown RBP5.6□□□□□ -1.51
MRPS28-203ENST00000518371 ZNF385BQ569K4 471 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 PRAMEF20Q5VT98 475 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 TMEM198Q66K66 360 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 NXNQ6DKJ4 435 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 NUP54Q7Z3B4 507 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 SZRD1Q7Z422 152 aa5.6□□□□□ -1.51
MRPS28-203ENST00000518371 WDR75Q8IWA0 830 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms