RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ADAM2Q99965 735 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAPKAP1Q9BPZ7 522 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CHCHD6Q9BRQ6 235 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM43Q9BTV4 400 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 RIOK2Q9BVS4 552 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 FAM126AQ9BYI3 521 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ALOXE3Q9BYJ1 711 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MS4A7Q9GZW8 240 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 COMMD4Q9H0A8 199 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GABARAPL1Q9H0R8 117 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 OSBPL2Q9H1P3 480 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SMOC2Q9H3U7 446 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 RIBC2Q9H4K1 309 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MEAF6Q9HAF1 191 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GPN1Q9HCN4 374 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ABCB9Q9NP78 766 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SIRT7Q9NRC8 400 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CHRAC1Q9NRG0 131 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ACSS1Q9NUB1 689 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 VNN3Q9NY84 501 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GTSE1Q9NYZ3 720 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CNOT2Q9NZN8 540 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 NLKQ9UBE8 527 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GRHPRQ9UBQ7 328 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF629Q9UEG4 869 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GIMAP2Q9UG22 337 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 EIF2B4Q9UI10 523 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC25A13Q9UJS0 675 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 BTRCQ9Y297 605 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 FBXO7Q9Y3I1 522 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MMACHCQ9Y4U1 282 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 V9GYS6 101 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPATA31A5Q5VU36 1347 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPATA31A7Q8IWB4 1347 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 PLCH1Q4KWH8 1693 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A0A6YYH2 397 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A0D9SG52 128 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A1W2PP18 115 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 A6NJ64 397 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR6C75A6NL08 312 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 B4E171 279 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF670-ZNF695F2Z2N8 137 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAN2B1O00754 1011 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 NEMP1O14524 444 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TPP1O14773 563 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 NRP1O14786 923 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CASKO14936 926 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MDM4O15151 490 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 NKRFO15226 690 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 BCAT2O15382 392 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 RRP8O43159 456 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MBTPS2O43462 519 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SSNA1O43805 119 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SSX4O60224 188 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAFKO60675 156 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CTNSO60931 367 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 BEST1O76090 585 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZFPL1O95159 310 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SCELO95171 688 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 STBD1O95210 358 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LY86O95711 162 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 IGHV2-5P01817 119 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 RPLP2P05387 115 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 HOXB5P09067 269 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 IQCF3P0C7M6 154 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 GAAP10253 952 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 GABRA1P14867 456 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 PAX1P15863 534 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF25P17030 456 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 HLA-DPA1P20036 260 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TPSB2P20231 275 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 AGXTP21549 392 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CNR1P21554 472 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 FGF7P21781 194 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 HMGB2P26583 209 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ABCD3P28288 659 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TEAD1P28347 426 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SDC4P31431 198 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ICAM3P32942 547 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 AHRP35869 848 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 GLP1RP43220 463 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAP2K4P45985 399 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC6A11P48066 632 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CCR6P51684 374 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 NAPAP54920 295 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SOX8P57073 446 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF280AP59817 542 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRPS1P60891 318 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 FMO1Q01740 532 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LIPEQ05469 1076 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC10A2Q12908 348 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TSPAN31Q12999 210 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LCP2Q13094 533 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 C1DQ13901 141 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAD2L1BPQ15013 274 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR8G1Q15617 311 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TRAM1Q15629 374 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TSNQ15631 228 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms