RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MPC1LP0DKB6 136 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ERVK-10P10266 1014 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 POU2F1P14859 743 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ETS2P15036 469 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 RPL10P27635 214 aaKnown RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 GABRB3P28472 473 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SERPINB3P29508 390 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 GP5P40197 560 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC1A2P43004 574 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 GCGRP47871 477 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CYB561P49447 251 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 HNMTP50135 292 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SERPINB9P50453 376 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 RASSF2P50749 326 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CLCN2P51788 898 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 AP1S2P56377 157 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SESN3P58005 492 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 B3GALT5-AS1P59052 145 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 GPX6P59796 221 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 IL2P60568 153 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ACTR3P61158 418 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ATP6V0D1P61421 351 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ABATP80404 500 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CDKL1Q00532 357 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 PLGLB1Q02325 96 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 TEKQ02763 1124 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC18A2Q05940 514 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 HSPA14Q0VDF9 509 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 PRKAA1Q13131 559 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SP140Q13342 867 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CTBP1Q13363 440 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 NFE2L1Q14494 772 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 KRT33BQ14525 404 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC10A1Q14973 349 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 HERPUD1Q15011 391 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 KLHL38Q2WGJ6 581 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 TRMT5Q32P41 509 aaKnown RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 LRRC23Q53EV4 343 aaPredicted RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CTSL3PQ5NE16 218 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 FAM182AQ5T1J6 154 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF648Q5T619 568 aaPredicted RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 NSUN5P2Q63ZY6 315 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 FAM45BPQ6NSW5 357 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 PPP4R4Q6NUP7 873 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 TMEM214Q6NUQ4 689 aaKnown RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF549Q6P9A3 640 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 PGM2L1Q6PCE3 622 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CES3Q6UWW8 571 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 IZUMO2Q6UXV1 221 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CYHR1Q6ZMK1 362 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 TIFABQ6ZNK6 161 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 FAM83HQ6ZRV2 1179 aaPredicted RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 DET1Q7L5Y6 550 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 STRA8Q7Z7C7 330 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 MTDHQ86UE4 582 aaKnown RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ZC3HC1Q86WB0 502 aaKnown RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 OOSP2Q86WS3 158 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 DCUN1D3Q8IWE4 304 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 C4orf33Q8N1A6 199 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 NKAPQ8N5F7 415 aaKnown RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 METTL25Q8N6Q8 603 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 KBTBD8Q8NFY9 601 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 FAM45AQ8TCE6 357 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CD200R1Q8TD46 325 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 DCAKDQ8WVC6 231 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 LCN9Q8WX39 176 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ATL1Q8WXF7 558 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ELMO1Q92556 727 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 KISS1RQ969F8 398 aaPredicted RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 TP53INP1Q96A56 240 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ZUFSPQ96AP4 578 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 R3HDM4Q96D70 268 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 MTBPQ96DY7 904 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC47A1Q96FL8 570 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 NSL1Q96IY1 281 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 UBXN10Q96LJ8 280 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 C10orf90Q96M02 699 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 C12orf66Q96MD2 445 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 GPR22Q99680 433 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 TUBB6Q9BUF5 446 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 CCDC106Q9BWC9 280 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SFXN3Q9BWM7 321 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 TMEM120AQ9BXJ8 343 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 NMUR2Q9GZQ4 415 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 WWP1Q9H0M0 922 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 PCBD2Q9H0N5 130 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 PIGMQ9H3S5 423 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SRMSQ9H3Y6 488 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 OSGEPL1Q9H4B0 414 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 FAM96AQ9H5X1 160 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 ACSS3Q9H6R3 686 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 LDAHQ9H6V9 325 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 EXO5Q9H790 373 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 PARVBQ9HBI1 364 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 NPHS2Q9NP85 383 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 TNFRSF19Q9NS68 423 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 IARS2Q9NSE4 1012 aaKnown RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 UTP6Q9NYH9 597 aaKnown RBP2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 PTTG2Q9NZH5 202 aa2.79□□□□□ -1.96
SCARNA13-201ENST00000516672 SENP1Q9P0U3 644 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms