RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SEC14L3Q9UDX4 400 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 EXOSC1Q9Y3B2 195 aaKnown RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 OR52A4PA6NMU1 304 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 INSIG1O15503 277 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PPIHO43447 177 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 LCMT2O60294 686 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 KRT36O76013 467 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 F10P00742 488 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 DBTP11182 482 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 MAGEA8P43361 318 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FNTAP49354 379 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CASP4P49662 377 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NOVA1P51513 510 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SLC7A2P52569 658 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SUCLG1P53597 346 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PRRX1P54821 245 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ATP5IP56385 69 aaPredicted RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NTHL1P78549 312 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 IL9RQ01113 521 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 RGS1Q08116 209 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NCBP1Q09161 790 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ATXN7L3Q14CW9 347 aaPredicted RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 RAB35Q15286 201 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CCDC6Q16204 474 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 UPP1Q16831 310 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ACER2Q5QJU3 275 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ADAMTSL4-AS1Q5T5F5 129 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ATL3Q6DD88 541 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PRR5LQ6MZQ0 368 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SCYL2Q6P3W7 929 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 LCLAT1Q6UWP7 414 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 KIF6Q6ZMV9 814 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FRRS1Q6ZNA5 592 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NANOGNBQ7Z5D8 188 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TTC5Q8N0Z6 440 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 UBE2J2Q8N2K1 259 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ZNF781Q8N8C0 355 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SUMF1Q8NBK3 374 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 OR4D5Q8NGN0 318 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 OR10G7Q8NGN6 311 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 OR1F12Q8NHA8 337 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 AGR3Q8TD06 166 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NABP1Q96AH0 204 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 COQ2Q96H96 371 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 GMPPAQ96IJ6 420 aaPredicted RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PIWIL1Q96J94 861 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NODALQ96S42 347 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PLIN2Q99541 437 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ST6GALNAC5Q9BVH7 336 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 RBM4Q9BWF3 364 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 POLR3FQ9H1D9 316 aaPredicted RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 WDR13Q9H1Z4 485 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SGK2Q9HBY8 427 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 DEPPQ9NTK1 212 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PLCXD1Q9NUJ7 323 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SUN2Q9UH99 717 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PCSK1NQ9UHG2 260 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 RPH3ALQ9UNE2 315 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 EXOGQ9Y2C4 368 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 MRPS28Q9Y2Q9 187 aaKnown RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 IFT52Q9Y366 437 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CAB39Q9Y376 341 aaPredicted RBP2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 DHRS7Q9Y394 339 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FBXO7Q9Y3I1 522 aa2.73□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NPIPA5A0A0B4J1W7 369 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 IGHV3-38A0A0C4DH36 116 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 A0A0U1RQS6 177 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BTBD17A6NE02 478 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ERVV-2B6SEH9 535 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 HHLA1C9JL84 531 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NPIPA5E9PKD4 350 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SLCO1B7G3V0H7 640 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TM9SF1O15321 606 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SRPX2O60687 465 aaPredicted RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TPST2O60704 377 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 DUS4LO95620 317 aaKnown RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CA1P00915 261 aaPredicted RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 JCHAINP01591 159 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ASGR1P07306 291 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SP1P08047 785 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FCGR3AP08637 254 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 IGFBP1P08833 259 aaPredicted RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 HOXB7P09629 217 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ALOX5P09917 674 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 GZMAP12544 262 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TBXA2RP21731 343 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CCKARP32238 428 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 RPL4P36578 427 aaKnown RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PEX19P40855 299 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 STK19P49842 368 aaPredicted RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PRMT2P55345 433 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ERVK-16P61578 105 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 RPL23AP62750 156 aaKnown RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 GNB1P62873 340 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PLOD1Q02809 727 aaPredicted RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SRSF5Q13243 272 aaKnown RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FHL1Q13642 323 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 IDI1Q13907 227 aa2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FASTKQ14296 549 aaKnown RBP2.72□□□□□ -1.97
SCARNA15.2-201ENST00000516409 RCN1Q15293 331 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms