RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 MEI4A8MW99 385 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 SULT2B1O00204 365 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 CHST1O43916 411 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 TSPAN2O60636 221 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 CLN5O75503 358 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 PDE5AO76074 875 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 SRP72O76094 671 aaKnown RBP-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 ANP32DO95626 131 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 ECDO95905 644 aaPredicted RBP-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 MOCS2O96007 188 aaPredicted RBP-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 IGKV1-39P01597 117 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 IGKV1D-39P04432 117 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 PSMC3P17980 439 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 AQP1P29972 269 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 NTSP30990 170 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 PSMB10P40306 273 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 CNTN2Q02246 1040 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 UBXN1Q04323 297 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 ZNF616Q08AN1 781 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 RSPO1Q2MKA7 263 aaPredicted RBP-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 CFAP221Q4G0U5 840 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 ENPP7Q6UWV6 458 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 ZNF621Q6ZSS3 439 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 CHST3Q7LGC8 479 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 CENPVQ7Z7K6 275 aaPredicted RBP-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 LUZP1Q86V48 1076 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 VSIG1Q86XK7 387 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 SAMD3Q8N6K7 520 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 OR52I1Q8NGK6 324 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 ZNF502Q8TBZ5 544 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 TEKT4Q8WW24 435 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 VPS39Q96JC1 886 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 C7orf26Q96N11 449 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 SHANK2-AS3Q9BTD1 123 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 MINDY3Q9H8M7 445 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 RAB9BQ9NP90 201 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 SLC2A8Q9NY64 477 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 OR1A1Q9P1Q5 309 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 ZNF222Q9UK12 451 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 CRYL1Q9Y2S2 319 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 OR1A2Q9Y585 309 aa-0.65□□□□□ -2.51
SCARNA23-201ENST00000516060 FGD5Q6ZNL6 1462 aa-0.66□□□□□ -2.51
SCARNA23-201ENST00000516060 IGLV11-55A0A075B6I3 123 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 A0A1W2PQ09 198 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 IGKV2-29A2NJV5 120 aaPredicted RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 C19orf81C9J6K1 198 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 PTGES3LE9PB15 166 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 C11orf98E9PRG8 122 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 LGALS9O00182 355 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 SCGB1D1O95968 90 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 HOXB7P09629 217 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 OR52Z1P0C646 297 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 TLX1NBP0CAT3 122 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 THRBP10828 461 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 GHRP10912 638 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 NPR2P20594 1047 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 COX7A1P24310 79 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 ACAT1P24752 427 aaKnown RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 KIR2DS2P43631 304 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 RPS11P62280 158 aaKnown RBP eCLIP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 PRKCDQ05655 676 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 RBPJQ06330 500 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 PPP2R5CQ13362 524 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 PSMD6Q15008 389 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 PLEKHS1Q5SXH7 462 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 WDR78Q5VTH9 848 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 FAM46CQ5VWP2 391 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 BHLHA15Q7RTS1 189 aaPredicted RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 LCA5Q86VQ0 697 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 SMYD1Q8NB12 490 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 COLGALT1Q8NBJ5 622 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 CCDC197Q8NCU1 140 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 OR2L3Q8NG85 312 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 NCOA7Q8NI08 942 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 SPSB1Q96BD6 273 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 AK8Q96MA6 479 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 TAAR1Q96RJ0 339 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 MPHOSPH6Q99547 160 aaKnown RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 ZNF559Q9BR84 538 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 ZNF416Q9BWM5 594 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 ZNF717Q9BY31 904 aaPredicted RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 FN3KQ9H479 309 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 FANCFQ9NPI8 374 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 PARP11Q9NR21 331 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 PLEK2Q9NYT0 353 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 CHORDC1Q9UHD1 332 aaPredicted RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 NOCTQ9UK39 431 aaKnown RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 TMED7Q9Y3B3 224 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 L3MBTL1Q9Y468 752 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 LIPGQ9Y5X9 500 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 LRRFIP2Q9Y608 721 aaKnown RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 CCDC88CQ9P219 2028 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 USP6P35125 1406 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 LTBP2Q14767 1821 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 AFF2P51816 1311 aa-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 DSTQ03001 7570 aaKnown RBP-0.66□□□□□ -2.52
SCARNA23-201ENST00000516060 PIKFYVEQ9Y2I7 2098 aa-0.67□□□□□ -2.52
SCARNA23-201ENST00000516060 EDDM13A0A1B0GTR0 161 aa-0.67□□□□□ -2.52
SCARNA23-201ENST00000516060 ATP6AP2A0A1C7CYW4 349 aa-0.67□□□□□ -2.52
SCARNA23-201ENST00000516060 GTPBP10A4D1E9 387 aaKnown RBP-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms