RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PRPF19Q9UMS4 504 aaKnown RBP19.34■□□□□ 0.69
LSM6-207ENST00000515311 PKD1L2Q7Z442 2459 aa19.34■□□□□ 0.69
LSM6-207ENST00000515311 PRAMEF27A3QJZ7 478 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 MKRN2OSH3BPM6 223 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 GYG2O15488 501 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 ARAFP10398 606 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 NR2F1P10589 423 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 IL12BP29460 328 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 LCN1P31025 176 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 HLCSP50747 726 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 PNLIPRP2P54317 469 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 POLE2P56282 527 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 LIPEQ05469 1076 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 NTRK2Q16620 822 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 ZNF630Q2M218 657 aaPredicted RBP19.33■□□□□ 0.68
LSM6-207ENST00000515311 ZNF791Q3KP31 576 aaPredicted RBP19.33■□□□□ 0.68
LSM6-207ENST00000515311 SAMD4BQ5PRF9 694 aaKnown RBP19.33■□□□□ 0.68
LSM6-207ENST00000515311 PRAMEF8Q5VWM4 474 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 PRAMEF7Q5VXH5 474 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 LINC00696Q6ZRV3 163 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 PTOV1Q86YD1 416 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 PRR22Q8IZ63 422 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 C11orf65Q8NCR3 313 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 EXTL1Q92935 676 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 COL21A1Q96P44 957 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 CDRT15Q96T59 188 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 ZNF350Q9GZX5 532 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 ALG2Q9H553 416 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 TRIM45Q9H8W5 580 aaPredicted RBP19.33■□□□□ 0.68
LSM6-207ENST00000515311 CALML5Q9NZT1 146 aa19.33■□□□□ 0.68
LSM6-207ENST00000515311 USP24Q9UPU5 2620 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 FAM220BPB1ANY3 271 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 STX11O75558 287 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 REM1O75628 298 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 OR6B1O95007 311 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 IGKV1D-16P01601 117 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 CASRP41180 1078 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 HPCAP84074 193 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 EFR3AQ14156 821 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 MAPK11Q15759 364 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 SYPL1Q16563 259 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 LACTB2Q53H82 288 aaPredicted RBP19.32■□□□□ 0.68
LSM6-207ENST00000515311 CCNJQ5T5M9 372 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 ERICH5Q6P6B1 374 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 FIGNL1Q6PIW4 674 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 YTHDF3Q7Z739 585 aaKnown RBP19.32■□□□□ 0.68
LSM6-207ENST00000515311 SLC30A8Q8IWU4 369 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 ZZZ3Q8IYH5 903 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 OR2T12Q8NG77 320 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 MAL2Q969L2 176 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 UTP23Q9BRU9 249 aaKnown RBP19.32■□□□□ 0.68
LSM6-207ENST00000515311 LRMDAQ9H2I8 198 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 PCDHGB7Q9Y5F8 929 aa19.32■□□□□ 0.68
LSM6-207ENST00000515311 ITPR1Q14643 2758 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 CACNA1GO43497 2377 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 SLC28A2O43868 658 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 H6PDO95479 791 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 BCHEP06276 602 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 HSD17B1P14061 328 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 ATP6V1C1P21283 382 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 PCGF2P35227 344 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 CYB561P49447 251 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 GSK3BP49841 420 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 CRISP3P54108 245 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 CDK6Q00534 326 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 GPAT3Q53EU6 434 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 LRRC74BQ6ZQY2 392 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 NUP54Q7Z3B4 507 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 ANKFN1Q8N957 763 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 TTC9Q92623 222 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 HAS2Q92819 552 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 PMM1Q92871 262 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 EFHD2Q96C19 240 aaPredicted RBP19.31■□□□□ 0.68
LSM6-207ENST00000515311 CRELD1Q96HD1 420 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 TMEM19Q96HH6 336 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 SGCZQ96LD1 299 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 ADOQ96SZ5 270 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 SAP130Q9H0E3 1048 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 BCL2L10Q9HD36 194 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 HPF1Q9NWY4 346 aa19.31■□□□□ 0.68
LSM6-207ENST00000515311 PRORSD1PA6NEY8 169 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 C5orf58C9J3I9 102 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 TP53I11O14683 189 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 HS6ST1O60243 411 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 UGT2B11O75310 529 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 WDPCPO95876 746 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 CHRM4P08173 479 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 CD96P40200 585 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 RFX3P48380 749 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 FBXW4P57775 412 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 NCALDP61601 193 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 TUBA3CQ13748 450 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 SCARB2Q14108 478 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 VEZF1Q14119 521 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 VMACQ2NL98 169 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 ZNF468Q5VIY5 522 aaPredicted RBP19.3■□□□□ 0.68
LSM6-207ENST00000515311 REEP3Q6NUK4 255 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 TUBA3EQ6PEY2 450 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 IGFL3Q6UXB1 125 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 IL20RBQ6UXL0 311 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms