RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	CCDC71	Q8IV32	467 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	VSTM4	Q8IW00	320 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ZNRF1	Q8ND25	227 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	OR1B1	Q8NGR6	318 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	OR2T6	Q8NHC8	308 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FAM76A	Q8TAV0	307 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	C11orf45	Q8TAV5	145 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	LRRC15	Q8TF66	581 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NABP1	Q96AH0	204 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	C18orf25	Q96B23	403 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	AGAP4	Q96P64	663 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	LGMN	Q99538	433 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TTYH2	Q9BSA4	534 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ST6GALNAC5	Q9BVH7	336 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RNF41	Q9H4P4	317 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FN3KRP	Q9HA64	309 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ADGRL4	Q9HBW9	690 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FGF22	Q9HCT0	170 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PIPOX	Q9P0Z9	390 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CRLS1	Q9UJA2	301 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MGAT4A	Q9UM21	535 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FBXO7	Q9Y3I1	522 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	GRIN2D	O15399	1336 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TRGV8	A0A0C4DH27	118 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MPTX1	A8MV57	137 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TM9SF1	O15321	606 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PPIH	O43447	177 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NUDT14	O95848	222 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SERPINA3	P01011	423 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TBXA2R	P21731	343 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PPP2R1B	P30154	601 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	GRIA1	P42261	906 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TDO2	P48775	406 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TMEM50B	P56557	158 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CCNA1	P78396	465 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SRPX	P78539	464 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FKBP3	Q00688	224 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MRPL28	Q13084	256 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CUL2	Q13617	745 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MESD	Q14696	234 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PHYHD1	Q5SRE7	291 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ZSCAN25	Q6NSZ9	544 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ZFAND4	Q86XD8	727 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SLC22A9	Q8IVM8	553 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SLC38A6	Q8IZM9	456 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CLDN19	Q8N6F1	224 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	STXBP6	Q8NFX7	210 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	OR52K2	Q8NGK3	314 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	AKR7L	Q8NHP1	331 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FAM3C	Q92520	227 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NT5C3B	Q969T7	300 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RAB3C	Q96E17	227 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FBXO17	Q96EF6	278 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SDSL	Q96GA7	329 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NSMCE3	Q96MG7	304 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PGLYRP2	Q96PD5	576 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TGM7	Q96PF1	710 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PLIN2	Q99541	437 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CCDC77	Q9BR77	488 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TRIM9	Q9C026	710 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MAGT1	Q9H0U3	335 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RAB18	Q9NP72	206 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MRPL39	Q9NYK5	338 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TMEM181	Q9P2C4	612 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	GALP	Q9UBC7	116 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CACNG5	Q9UF02	275 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CYTH4	Q9UIA0	394 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	LCMT1	Q9UIC8	334 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ANAPC7	Q9UJX3	599 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RARRES3	Q9UL19	164 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MAD1L1	Q9Y6D9	718 aa		4.16	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TRAV26-1	A0A087WT03	109 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ARHGEF33	A8MVX0	844 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	C11orf98	E9PRG8	122 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	BTN3A3	O00478	584 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	LCMT2	O60294	686 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CIB2	O75838	187 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SCGN	O76038	276 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	B3GAT3	O94766	335 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IGLV1-44	P01699	117 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IGF1	P05019	195 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CAPN1	P07384	714 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IGFBP1	P08833	259 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SFTPC	P11686	197 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	HSD17B1	P14061	328 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NCF2	P19878	526 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CSTF1	Q05048	431 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF146	Q15072	292 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MS4A18	Q3C1V0	323 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MOGAT2	Q3SYC2	334 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZFP69	Q49AA0	526 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CFAP221	Q4G0U5	840 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ACER2	Q5QJU3	275 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TPGS2	Q68CL5	300 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	KCNIP4	Q6PIL6	250 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GDPGP1	Q6ZNW5	385 aa		4.15	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NANOGNB	Q7Z5D8	188 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms