RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 MRPS22P82650 360 aaKnown RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 CRYZQ08257 329 aaKnown RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.85□□□□□ -0.99
RNF4-221ENST00000513643 ATG16L1Q676U5 607 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 VASNQ6EMK4 673 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 APOOLQ6UXV4 268 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 SEM1Q6ZVN7 128 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 NCCRP1Q6ZVX7 275 aaPredicted RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 HDXQ7Z353 690 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 WDR53Q7Z5U6 358 aaPredicted RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 MRGPRGQ86SM5 289 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 CD163Q86VB7 1156 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 TRIM42Q8IWZ5 723 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 RPRMLQ8N4K4 120 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 FADS6Q8N9I5 356 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 SLC16A11Q8NCK7 471 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 NUP43Q8NFH3 380 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 SARAFQ96BY9 339 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 EFHD2Q96C19 240 aaPredicted RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 C16orf58Q96GQ5 468 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 TEX37Q96LM6 180 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 MS4A4EQ96PG1 132 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 PRPF18Q99633 342 aaKnown RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 TIMP4Q99727 224 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 PAIP2Q9BPZ3 127 aaKnown RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 OSBPL11Q9BXB4 747 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 OR2B2Q9GZK3 357 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 PRDM14Q9GZV8 571 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 TP63Q9H3D4 680 aaPredicted RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 CXorf36Q9H7Y0 433 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 Q9N2J8 555 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 DUSP22Q9NRW4 184 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 PNPLA3Q9NST1 481 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 ATAD3AQ9NVI7 634 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 AIG1Q9NVV5 245 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 FAM120CQ9NX05 1096 aaKnown RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 NKIRAS1Q9NYS0 192 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 FLRT3Q9NZU0 649 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 SUCOQ9UBS9 1254 aaKnown RBP8.85□□□□□ -0.99
RNF4-221ENST00000513643 B4GALT7Q9UBV7 327 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 ABCG2Q9UNQ0 655 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 MAPRE3Q9UPY8 281 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 WIF1Q9Y5W5 379 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 NCKAP5O14513 1909 aa8.85□□□□□ -0.99
RNF4-221ENST00000513643 C2orf72A6NCS6 295 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 SOX30O94993 753 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 KCNK2O95069 426 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 C6orf47O95873 294 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 HMGN2P05204 90 aaKnown RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 TPOP07202 933 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 HOXD4P09016 255 aaPredicted RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 EFNA1P20827 205 aaPredicted RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 IL12AP29459 219 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 EVI2BP34910 448 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 ZFP36L2P47974 494 aaKnown RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 CCT3P49368 545 aaKnown RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 MRPL19P49406 292 aaKnown RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 GFRA1P56159 465 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 HBA1P69905 142 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 PRR5P85299 388 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 ZNF155Q12901 538 aaPredicted RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 DUSP5Q16690 384 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 DECR1Q16698 335 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 ZNF630Q2M218 657 aaPredicted RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 LSM12Q3MHD2 195 aaKnown RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 VPS26BQ4G0F5 336 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 EIPR1Q53HC9 387 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 HIST2H2BCQ6DN03 193 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 ANGPTL8Q6UXH0 198 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 SPATA19Q7Z5L4 167 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 ADGRE4PQ86SQ3 457 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 PLCZ1Q86YW0 608 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 FAM83FQ8NEG4 500 aaPredicted RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 OR1J4Q8NGS1 313 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 GOT1L1Q8NHS2 421 aaPredicted RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 PIWIL2Q8TC59 973 aaKnown RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 MIPOL1Q8TD10 442 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 SFXN5Q8TD22 340 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 MGARPQ8TDB4 240 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 ACTRT2Q8TDY3 377 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 C7orf26Q96N11 449 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 STACQ99469 402 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 TREX2Q9BQ50 279 aaPredicted RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 TTYH2Q9BSA4 534 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 DUSP26Q9BV47 211 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 SLC6A15Q9H2J7 730 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 PIGUQ9H490 435 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 WDR55Q9H6Y2 383 aaPredicted RBP8.84□□□□□ -0.99
RNF4-221ENST00000513643 METTL7AQ9H8H3 244 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 C3orf14Q9HBI5 128 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 FBXL2Q9UKC9 423 aa8.84□□□□□ -0.99
RNF4-221ENST00000513643 CSMD1Q96PZ7 3565 aa8.83□□□□□ -1
RNF4-221ENST00000513643 CACNA1CQ13936 2221 aa8.83□□□□□ -1
RNF4-221ENST00000513643 PRSS51A0A1B0GVH4 220 aa8.83□□□□□ -1
RNF4-221ENST00000513643 A1L4Q6 167 aa8.83□□□□□ -1
RNF4-221ENST00000513643 TRPC5OSA6NMA1 111 aa8.83□□□□□ -1
RNF4-221ENST00000513643 C17orf51A8MQB3 221 aa8.83□□□□□ -1
RNF4-221ENST00000513643 AHRRA9YTQ3 701 aa8.83□□□□□ -1
RNF4-221ENST00000513643 HMGB1P1B2RPK0 211 aaPredicted RBP8.83□□□□□ -1
RNF4-221ENST00000513643 ALG1L2C9J202 215 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms