RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 NME3Q13232 169 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 DPYSQ14117 519 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 RIPPLY2Q5TAB7 128 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 PAMR1Q6UXH9 720 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 GCNT7Q6ZNI0 430 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 TSEN54Q7Z6J9 526 aaKnown RBP3.96□□□□□ -1.78
CHD1-209ENST00000512844 KDM8Q8N371 416 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 FAM133AQ8N9E0 248 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 FAM184AQ8NB25 1140 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 NEK11Q8NG66 645 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 OR52K1Q8NGK4 314 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 OR52J3Q8NH60 311 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 RNASE8Q8TDE3 154 aaKnown RBP3.96□□□□□ -1.78
CHD1-209ENST00000512844 C9orf85Q96MD7 179 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 DEFB126Q9BYW3 111 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 NACA2Q9H009 215 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 CENPMQ9NSP4 180 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 FETUBQ9UGM5 382 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 CLEC4EQ9ULY5 219 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 ZNF256Q9Y2P7 627 aaPredicted RBP3.96□□□□□ -1.78
CHD1-209ENST00000512844 CLCA3PQ9Y6N3 262 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 ABCC8Q09428 1581 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 ATRXP46100 2492 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 SOGA1O94964 1423 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 C11orf98E9PRG8 122 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 BUB1O43683 1085 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 GJB5O95377 273 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 SYNGR4O95473 234 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 TPM1P09493 284 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 GZMAP12544 262 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 CD9P21926 228 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 ZBTB25P24278 435 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 RGRP47804 291 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 CAMLGP49069 296 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 ARHGDIBP52566 201 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 SSTP61278 116 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 NOP14P78316 857 aaKnown RBP3.95□□□□□ -1.78
CHD1-209ENST00000512844 PAX2Q02962 417 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 GFPT1Q06210 699 aaPredicted RBP3.95□□□□□ -1.78
CHD1-209ENST00000512844 CD47Q08722 323 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 SCGB2A2Q13296 93 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 MSLNQ13421 630 aaPredicted RBP3.95□□□□□ -1.78
CHD1-209ENST00000512844 BTG3Q14201 252 aaPredicted RBP3.95□□□□□ -1.78
CHD1-209ENST00000512844 WDR43Q15061 677 aaKnown RBP eCLIP3.95□□□□□ -1.78
CHD1-209ENST00000512844 TGIF1Q15583 401 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 MS4A13Q5J8X5 152 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 ATAD3BQ5T9A4 648 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 CENPPQ6IPU0 288 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 SLC25A24Q6NUK1 477 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 TAS2R42Q7RTR8 314 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 VASH2Q86V25 355 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 RFESDQ8TAC1 157 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 RNF139Q8WU17 664 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 CCT8L2Q96SF2 557 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 THUMPD2Q9BTF0 503 aaKnown RBP3.95□□□□□ -1.78
CHD1-209ENST00000512844 PAXXQ9BUH6 204 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 TEX13AQ9BXU3 409 aaPredicted RBP3.95□□□□□ -1.78
CHD1-209ENST00000512844 DDX47Q9H0S4 455 aaKnown RBP3.95□□□□□ -1.78
CHD1-209ENST00000512844 FANCEQ9HB96 536 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 HPS4Q9NQG7 708 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 CYP39A1Q9NYL5 469 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 TMOD2Q9NZR1 351 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 CLIP2Q9UDT6 1046 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 ATP6V1HQ9UI12 483 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 SNX6Q9UNH7 406 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 TDRKHQ9Y2W6 561 aaKnown RBP3.95□□□□□ -1.78
CHD1-209ENST00000512844 KIF25-AS1Q9Y6Z4 181 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 FAM205AQ6ZU69 1335 aa3.95□□□□□ -1.78
CHD1-209ENST00000512844 CUX2O14529 1486 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 DHX57Q6P158 1386 aaKnown RBP3.94□□□□□ -1.78
CHD1-209ENST00000512844 A8MX80 341 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 H0Y8G0 127 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 H0YIV9 168 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 SPOPO43791 374 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 LCMT2O60294 686 aaKnown RBP3.94□□□□□ -1.78
CHD1-209ENST00000512844 RHOBTB1O94844 696 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 SLITRK3O94933 977 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 DUX4L4P0CJ87 422 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 SAA4P35542 130 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 SOX6P35712 828 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 TNFRSF4P43489 277 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 RABIFP47224 123 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 PITPNBP48739 271 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 MEOX2P50222 304 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 BEX3Q00994 111 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 CMPK2Q5EBM0 449 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 SEL1L2Q5TEA6 688 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 CGB2Q6NT52 195 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 NEK5Q6P3R8 708 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 RANBP3LQ86VV4 465 aaPredicted RBP3.94□□□□□ -1.78
CHD1-209ENST00000512844 SLC22A16Q86VW1 577 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 CNTN4Q8IWV2 1026 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 C11orf42Q8N5U0 333 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 Q8N9G6 341 aaPredicted RBP3.94□□□□□ -1.78
CHD1-209ENST00000512844 DRAXINQ8NBI3 349 aaPredicted RBP3.94□□□□□ -1.78
CHD1-209ENST00000512844 TMEM37Q8WXS4 190 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 LHX4Q969G2 390 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 ITFG2Q969R8 447 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 RAB7BQ96AH8 199 aa3.94□□□□□ -1.78
CHD1-209ENST00000512844 PIWIL1Q96J94 861 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms