RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 CUL1Q13616 776 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 CCNIQ14094 377 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SLMAPQ14BN4 828 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 MLC1Q15049 377 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 PPA1Q15181 289 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 CTSL3PQ5NE16 218 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 LRRC38Q5VT99 294 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 FNDC7Q5VTL7 733 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ZNF470Q6ECI4 717 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ZNF544Q6NX49 715 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ZNF549Q6P9A3 640 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 TMEM108Q6UXF1 575 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ZNF534Q76KX8 674 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 BHLHA15Q7RTS1 189 aaPredicted RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 SSX8Q7RTT4 187 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 NUP54Q7Z3B4 507 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SLC46A3Q7Z3Q1 461 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 PLCZ1Q86YW0 608 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 KLHDC8AQ8IYD2 350 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 Q8N1Y9 231 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 MPP5Q8N3R9 675 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 CEP112Q8N8E3 955 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ABHD11Q8NFV4 315 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 TTLQ8NG68 377 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 OR4K17Q8NGC6 315 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 OR4K1Q8NGD4 311 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 OR52K1Q8NGK4 314 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SLC5A11Q8WWX8 675 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ANKRD7Q92527 254 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 RIT1Q92963 219 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 NXNL1Q96CM4 212 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 TMCO6Q96DC7 493 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 FBXO17Q96EF6 278 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SMIM10Q96HG1 83 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 REXO5Q96IC2 774 aaKnown RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 GMPPAQ96IJ6 420 aaPredicted RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 CSF3RQ99062 836 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SLC6A7Q99884 636 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 GORASP1Q9BQQ3 440 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 PELOQ9BRX2 385 aaKnown RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 SOX7Q9BT81 388 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ERVK-6Q9BXR3 956 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 TRIM54Q9BYV2 358 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 POTEKPQ9BYX7 375 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ROGDIQ9GZN7 287 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 P2RY12Q9H244 342 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 LPAR2Q9HBW0 351 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 SMURF1Q9HCE7 757 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 GALNT9Q9HCQ5 603 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 MYNNQ9NPC7 610 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 GLRX2Q9NS18 164 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 OXSMQ9NWU1 459 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 DAPP1Q9UN19 280 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 ERVK-19Q9WJR5 959 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 COA3Q9Y2R0 106 aaPredicted RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNF4-211ENST00000509206 COMMD10Q9Y6G5 202 aa3.41□□□□□ -1.86
RNF4-211ENST00000509206 YLPM1P49750 1951 aaKnown RBP3.41□□□□□ -1.86
RNF4-211ENST00000509206 NCKAP5O14513 1909 aa3.4□□□□□ -1.86
RNF4-211ENST00000509206 LOC100653049A0A140TA62 436 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 CTAGE9A4FU28 777 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 PRAMEF25A6NGN4 478 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 ANKDD1BA6NHY2 528 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 H3BML4 177 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 ZNF561-AS1K7EIQ3 104 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 APOC4-APOC2K7ER74 178 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 HRKO00198 91 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 CYR61O00622 381 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 KRT34O76011 436 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 IL33O95760 270 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 APOC2P02655 101 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 IGKV3-11P04433 115 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 AMY2AP04746 511 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 SERPING1P05155 500 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 C8GP07360 202 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 PABPC4LP0CB38 370 aaKnown RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 ALOX15P16050 662 aaPredicted RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 HK1P19367 917 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 AMY2BP19961 511 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 IL11P20809 199 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 PTAFRP25105 342 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 PSMA3P25788 255 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 CERS1P27544 350 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 IL2RGP31785 369 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 CETN2P41208 172 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 RGS4P49798 205 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 SUCLG1P53597 346 aaKnown RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 CHRNEQ04844 493 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 RASGEF1BQ0VAM2 473 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 BAMBIQ13145 260 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 SP140Q13342 867 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 KLF1Q13351 362 aaPredicted RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 SNTA1Q13424 505 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 P2RY6Q15077 328 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 EBPQ15125 230 aaKnown RBP3.4□□□□□ -1.87
RNF4-211ENST00000509206 FAM189A2Q15884 450 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 MSMPQ1L6U9 139 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 AP5B1Q2VPB7 878 aa3.4□□□□□ -1.87
RNF4-211ENST00000509206 TCHHL1Q5QJ38 904 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms