RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TENM4Q6N022 2769 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 GBF1Q92538 1859 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 USP9XQ93008 2570 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 A0A1B0GUL6 1792 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 SH3PXD2BA1X283 911 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 SLC16A8O95907 504 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 GSTA2P09210 222 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 C8orf89P0DMQ9 161 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 IL9P15248 144 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 CALML3P27482 149 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 MAGEA9P43362 315 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 P2RY14Q15391 338 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 OTOGLQ3ZCN5 2332 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 HSP90AB3PQ58FF7 597 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 LRRC38Q5VT99 294 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 C1orf189Q5VU69 101 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 FAM219BQ5XKK7 198 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 FAM47EQ6ZV65 393 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 ATAD1Q8NBU5 361 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 GGHQ92820 318 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 RAB3CQ96E17 227 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 CDKN2AIPNLQ96HQ2 116 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 PIWIL1Q96J94 861 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 CITED2Q99967 270 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 RPAP1Q9BWH6 1393 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 PORCNQ9H237 461 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 IKZF5Q9H5V7 419 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 ASB8Q9H765 288 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 Q9HAA7 133 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 SEC14L4Q9UDX3 406 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 IGSF10Q6WRI0 2623 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 HECTD1Q9ULT8 2610 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 MYO18BQ8IUG5 2567 aa3.57□□□□□ -1.84
TOPBP1-206ENST00000508524 FREM2Q5SZK8 3169 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 CXCL11O14625 94 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 TBCAO75347 108 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 GLCEO94923 617 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 LYPD3O95274 346 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 GH1P01241 217 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 EPOP01588 193 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 MFAP2P55001 183 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 KIAA0040Q15053 153 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 ISXQ2M1V0 245 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 CCDC152Q4G0S7 254 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 APOBEC3HQ6NTF7 200 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 ASPGQ86U10 573 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 FBXO16Q8IX29 292 aaPredicted RBP3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 FBXW8Q8N3Y1 598 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 ZNF564Q8TBZ8 553 aaPredicted RBP3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 CRYGNQ8WXF5 182 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 ULK4Q96C45 1275 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 PLSCR3Q9NRY6 295 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 TMEM161AQ9NX61 479 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 IMPAD1Q9NX62 359 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 DNAJB9Q9UBS3 223 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 ARMCX3Q9UH62 379 aaPredicted RBP3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 FBXL5Q9UKA1 691 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 ERVK-19Q9WJR5 959 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 DMXL2Q8TDJ6 3036 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 DLG5Q8TDM6 1919 aa3.56□□□□□ -1.84
TOPBP1-206ENST00000508524 KALRNO60229 2985 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 AKAP13Q12802 2813 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 CFAP46Q8IYW2 2715 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 TIMM44O43615 452 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 SLU7O95391 586 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 PRAMEF12O95522 483 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 CPNE6O95741 557 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 IGHV3-9P01782 118 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 PCCAP05165 728 aaPredicted RBP3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 ARHGDIAP52565 204 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 NDST1P52848 882 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 VCPP55072 806 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 EIF4EBP2Q13542 120 aaPredicted RBP3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 HERC4Q5GLZ8 1057 aaPredicted RBP3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 ACER2Q5QJU3 275 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 ZNF544Q6NX49 715 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 GPR137CQ8N3F9 429 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 OR7G3Q8NG95 312 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 LINC01006Q8NI28 216 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 CCDC114Q96M63 670 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 TNMDQ9H2S6 317 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 TMEM206Q9H813 350 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 SLC25A19Q9HC21 320 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 GDF3Q9NR23 364 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 SPG21Q9NZD8 308 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 ADAM22Q9P0K1 906 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 SEPT10Q9P0V9 454 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 TBX21Q9UL17 535 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 KMT2EQ8IZD2 1858 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 LOC285556D6RIA3 1793 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 WDFY3Q8IZQ1 3526 aa3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 COL4A4P53420 1690 aaPredicted RBP3.55□□□□□ -1.84
TOPBP1-206ENST00000508524 WI2-2373I1.2A0A1W2PRP0 233 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 HTATSF1O43719 755 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 CYBAP13498 195 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 TNFSF10P50591 281 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 FKBP1AP62942 108 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 RBP5P82980 135 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 TSPY1Q01534 308 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 HSPA14Q0VDF9 509 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms