RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SLC6A13Q9NSD5 602 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 SACM1LQ9NTJ5 587 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 ANKRD10Q9NXR5 420 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 HMGN4O00479 90 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 MAN1A2O60476 641 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 TSPAN2O60636 221 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 HNRNPCL1O60812 293 aaKnown RBP18.48■□□□□ 0.55
USP53-203ENST00000507597 NME6O75414 186 aaPredicted RBP18.48■□□□□ 0.55
USP53-203ENST00000507597 SLC25A12O75746 678 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 CD1EP15812 388 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 RASSF2P50749 326 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 CRISP3P54108 245 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 RBBP4Q09028 425 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 SNTA1Q13424 505 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 ZNF169Q14929 603 aaPredicted RBP18.48■□□□□ 0.55
USP53-203ENST00000507597 GPAT3Q53EU6 434 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 ZNF766Q5HY98 468 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 GCNT6Q5T4J0 391 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 HEPHL1Q6MZM0 1159 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 OR4N2Q8NGD1 307 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 TRNT1Q96Q11 434 aaKnown RBP18.48■□□□□ 0.55
USP53-203ENST00000507597 CPPED1Q9BRF8 314 aaPredicted RBP18.48■□□□□ 0.55
USP53-203ENST00000507597 METTL7AQ9H8H3 244 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 ZNF71Q9NQZ8 489 aaPredicted RBP18.48■□□□□ 0.55
USP53-203ENST00000507597 SDHAF3Q9NRP4 125 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 ARL8BQ9NVJ2 186 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 B3GNT3Q9Y2A9 372 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 MED13Q9UHV7 2174 aa18.48■□□□□ 0.55
USP53-203ENST00000507597 GXYLT2A0PJZ3 443 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 ATP5HO75947 161 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 SP1P08047 785 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 BMP2P12643 396 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 ETFAP13804 333 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 CASP9P55211 416 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 CAPRIN1Q14444 709 aaKnown RBP18.47■□□□□ 0.55
USP53-203ENST00000507597 CYP51A1Q16850 503 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 SPINK14Q6IE38 97 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 TMEM81Q6P7N7 255 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 FIGNL1Q6PIW4 674 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 LYPD8Q6UX82 237 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 LRRC74BQ6ZQY2 392 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 Q6ZS92 163 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 SERPINA11Q86U17 422 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 MSRB3Q8IXL7 192 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 PSD4Q8NDX1 1056 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 SPPL2AQ8TCT8 520 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 PAQR8Q8TEZ7 354 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 EFHD2Q96C19 240 aaPredicted RBP18.47■□□□□ 0.55
USP53-203ENST00000507597 SDF2Q99470 211 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 UBQLN4Q9NRR5 601 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 ABCG2Q9UNQ0 655 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 WDR45Q9Y484 360 aa18.47■□□□□ 0.55
USP53-203ENST00000507597 ANKRD33BA6NCL7 494 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 H3BNH8 94 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 SCDO00767 359 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 DNAJA2O60884 412 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 NEURL1O76050 574 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 SNX4O95219 450 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 CNR1P21554 472 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 SLC6A2P23975 617 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 FBXW4P57775 412 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 KLRB1Q12918 225 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 INAQ16352 499 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 ZNF630Q2M218 657 aaPredicted RBP18.46■□□□□ 0.55
USP53-203ENST00000507597 FLYWCH1Q4VC44 716 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 COX20Q5RI15 118 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 PRAMEF8Q5VWM4 474 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 PRAMEF7Q5VXH5 474 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 SLC30A6Q6NXT4 461 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 ERICH5Q6P6B1 374 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 FBXW8Q8N3Y1 598 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 EXD3Q8N9H8 876 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 C11orf65Q8NCR3 313 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 MDS2Q8NDY4 140 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 TNIP2Q8NFZ5 429 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 OR5M3Q8NGP4 307 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 RAB8BQ92930 207 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 PNPLA2Q96AD5 504 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 OTUB1Q96FW1 271 aaPredicted RBP18.46■□□□□ 0.55
USP53-203ENST00000507597 SERHL2Q9H4I8 314 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 TMEM38AQ9H6F2 299 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 KAT8Q9H7Z6 458 aaKnown RBP18.46■□□□□ 0.55
USP53-203ENST00000507597 A4GALTQ9NPC4 353 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 KLRF1Q9NZS2 232 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 DOCK10Q96BY6 2186 aa18.46■□□□□ 0.55
USP53-203ENST00000507597 NUP214P35658 2090 aaPredicted RBP18.46■□□□□ 0.55
USP53-203ENST00000507597 MAP1BP46821 2468 aaKnown RBP18.46■□□□□ 0.55
USP53-203ENST00000507597 ATXN7O15265 892 aaPredicted RBP18.45■□□□□ 0.54
USP53-203ENST00000507597 SLC28A2O43868 658 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 UGT2B11O75310 529 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 F10P00742 488 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 NGFRP08138 427 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 CPA2P48052 419 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 MVDP53602 400 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 MTPNP58546 118 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 INTS11Q5TA45 600 aaKnown RBP18.45■□□□□ 0.54
USP53-203ENST00000507597 ZNF468Q5VIY5 522 aaPredicted RBP18.45■□□□□ 0.54
USP53-203ENST00000507597 RPUSD3Q6P087 351 aaKnown RBP18.45■□□□□ 0.54
USP53-203ENST00000507597 PACS2Q86VP3 889 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 KRT73Q86Y46 540 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms