RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SNX8Q9Y5X2 465 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 CHCHD2Q9Y6H1 151 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 BSNQ9UPA5 3926 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 CFAP46Q8IYW2 2715 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 A0A087WZY1 265 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 TRBV5-3A0A0A0MS03 114 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 OR14I1A6ND48 311 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 CLIC1O00299 241 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 WWP2O00308 870 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 PRKNO60260 465 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 SUSD5O60279 629 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 HCN1O60741 890 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 PDE9AO76083 593 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 KCNK2O95069 426 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ETS2P15036 469 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 HOXB9P17482 250 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 CD97P48960 835 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 CRISP3P54108 245 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ATP12AP54707 1039 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 HPCAP84074 193 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 C17orf67Q0P5P2 114 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 DUSP8Q13202 625 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 LASP1Q14847 261 aaKnown RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 KRT72Q14CN4 511 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF630Q2M218 657 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF750Q32MQ0 723 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 MMEL1Q495T6 779 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 TIGD2Q4W5G0 525 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 C6orf10Q5SRN2 563 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 INTS11Q5TA45 600 aaKnown RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 LINC00696Q6ZRV3 163 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF621Q6ZSS3 439 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 NET1Q7Z628 596 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF440Q8IYI8 595 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 CCDC197Q8NCU1 140 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 TNIP2Q8NFZ5 429 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 GPR151Q8TDV0 419 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 HGDQ93099 445 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 UCN3Q969E3 161 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF597Q96LX8 424 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 MESP1Q9BRJ9 268 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 TRIM4Q9C037 500 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF350Q9GZX5 532 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 PAIP1Q9H074 479 aaKnown RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 MTHFD2LQ9H903 347 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ZFP64Q9NPA5 681 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ACKR4Q9NPB9 350 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 A4GALTQ9NPC4 353 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 CNOT11Q9UKZ1 510 aaKnown RBP7.78□□□□□ -1.16
PDGFC-205ENST00000506880 SLC35A3Q9Y2D2 325 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 IFT52Q9Y366 437 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 SHANK1Q9Y566 2161 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF407Q9C0G0 2248 aa7.78□□□□□ -1.16
PDGFC-205ENST00000506880 A0A0G2JPF8 293 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 A0A1W2PS29 197 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 C7orf72A4D263 438 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 PRORSD1PA6NEY8 169 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 PRAMEF25A6NGN4 478 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 HNRNPCL2B2RXH8 293 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 HNRNPCL3B7ZW38 293 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 HRKO00198 91 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 NR5A2O00482 541 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 FAAHO00519 579 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 SCDO00767 359 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 EIF4E2O60573 245 aaKnown RBP7.77□□□□□ -1.17
PDGFC-205ENST00000506880 TRIM3O75382 744 aaPredicted RBP7.77□□□□□ -1.17
PDGFC-205ENST00000506880 REM1O75628 298 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 CBR3O75828 277 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 GLSO94925 669 aaPredicted RBP7.77□□□□□ -1.17
PDGFC-205ENST00000506880 OR6B1O95007 311 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 IGHG3P01860 377 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 THBS1P07996 1170 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 CELA2AP08217 269 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 FREM3P0C091 2139 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 HNRNPCL4P0DMR1 293 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 EDN3P14138 238 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 HPGDP15428 266 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 CAPN3P20807 821 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 ADH6P28332 368 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 GABRA3P34903 492 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 EVI2BP34910 448 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 PTGER4P35408 488 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 SOAT1P35610 550 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 CASP3P42574 277 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 DGKQP52824 942 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 SEC24CP53992 1094 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 RBPJQ06330 500 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 GAB1Q13480 694 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 VEZF1Q14119 521 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 RGNQ15493 299 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF141Q15928 474 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 PRSS53Q2L4Q9 553 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 DCST2Q5T1A1 773 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF324BQ6AW86 544 aaPredicted RBP7.77□□□□□ -1.17
PDGFC-205ENST00000506880 ANKRD26P1Q6NSI1 321 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 IL20RBQ6UXL0 311 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 DLEU7Q6UYE1 221 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 NPSR1Q6W5P4 371 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 C16orf62Q7Z3J2 963 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms