RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 DDX18Q9NVP1 670 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 NTMQ9P121 344 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 FBXL2Q9UKC9 423 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 CBLCQ9ULV8 474 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 FIS1Q9Y3D6 152 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 TRAF6Q9Y4K3 522 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 ANKRD17O75179 2603 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 DOCK7Q96N67 2140 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 TTC36A6NLP5 189 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 C17orf51A8MQB3 221 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 PIP5K1BO14986 540 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 FADS1O60427 444 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 ZIC3O60481 467 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 IL33O95760 270 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 BPGMP07738 259 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 BCKDHAP12694 445 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 CAPN3P20807 821 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 GRK2P25098 689 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 EVI2BP34910 448 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 KRT20P35900 424 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNF136P52737 540 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 WNT3P56703 355 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 RPL38P63173 70 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 TLE4Q04727 773 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 GAB1Q13480 694 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 TOMM20Q15388 145 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 SF3B4Q15427 424 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 FBXL19-AS1Q494R0 122 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 ANKRD26P1Q6NSI1 321 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 ZCCHC23Q6ZST2 131 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 WDR53Q7Z5U6 358 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 TRIM42Q8IWZ5 723 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 FADS6Q8N9I5 356 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 GFM2Q969S9 779 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 CIDECQ96AQ7 238 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 MTERF3Q96E29 417 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 GIMAP5Q96F15 307 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 C3orf30Q96M34 536 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 TSSK3Q96PN8 268 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 SH3GL2Q99962 352 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 RTN4RQ9BZR6 473 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 CALHM2Q9HA72 323 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 EML4Q9HC35 981 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 ACSS1Q9NUB1 689 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNF629Q9UEG4 869 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 KCNN3Q9UGI6 736 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 BAIAP2L1Q9UHR4 511 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 ABCG2Q9UNQ0 655 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 CAMK2AQ9UQM7 478 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 L3MBTL1Q9Y468 752 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 OR10H1Q9Y4A9 318 aa8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 V9GYY5 206 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-209ENST00000506632 TEP1Q99973 2627 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 IGLV3-32A0A0A0MS00 114 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 SYT5O00445 386 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 DVL2O14641 736 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 AKAP10O43572 662 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 NKX2-2O95096 273 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 F12P00748 615 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 PRPS2P11908 318 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNF708P17019 499 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 CHMP24386 653 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 DPP4P27487 766 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 ASMTP46597 345 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 LHX2P50458 406 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 CLDN18P56856 261 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 B3GALT5-AS1P59052 145 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNF844Q08AG5 666 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 HSPB3Q12988 150 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 MLC1Q15049 377 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNHIT3Q15649 155 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 DECR1Q16698 335 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 GALNTL6Q49A17 601 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 TNFAIP8L3Q5GJ75 292 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 SH2D4BQ5SQS7 431 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 CES4AQ5XG92 561 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 IFNEQ86WN2 208 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 DDIASQ8IXT1 998 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 OR2M3Q8NG83 312 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 OR14L1PQ8NHC6 308 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 CLHC1Q8NHS4 586 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 ZFP28Q8NHY6 868 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 PPCDCQ96CD2 204 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 DTNBP1Q96EV8 351 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 ZBED6CLQ96FA7 236 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 PPP3R2Q96LZ3 170 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 TUBA1CQ9BQE3 449 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 PARD6BQ9BYG5 372 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 Q9N2J8 555 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 SSU72Q9NP77 194 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 SIRT3Q9NTG7 399 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 FAM120CQ9NX05 1096 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 TAS2R10Q9NYW0 307 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 FLRT3Q9NZU0 649 aa8.23□□□□□ -1.09
PDLIM5-209ENST00000506632 CLCF1Q9UBD9 225 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms