RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 GSTT2BP0CG30 244 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 DNAH10OSP0CZ25 163 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 XCR1P46094 333 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 CD47Q08722 323 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 SPP2Q13103 211 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 RFTN1Q14699 578 aaPredicted RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 SLX4IPQ5VYV7 408 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 VPS36Q86VN1 386 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 PARGQ86W56 976 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 MCOLN2Q8IZK6 566 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 HDDC3Q8N4P3 179 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 NFAM1Q8NET5 270 aaPredicted RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 BADQ92934 168 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 ADIPOR1Q96A54 375 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 MRPL38Q96DV4 380 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 FAM111AQ96PZ2 611 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 WRAP53Q9BUR4 548 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 HSD3B7Q9H2F3 369 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 KAT8Q9H7Z6 458 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 ROPN1Q9HAT0 212 aaPredicted RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 TRPV5Q9NQA5 729 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 EXOSC3Q9NQT5 275 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 YAE1D1Q9NRH1 226 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 VNN3Q9NY84 501 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 DPM3Q9P2X0 92 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 MOKQ9UQ07 419 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 PIN4Q9Y237 131 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 EXOSC1Q9Y3B2 195 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 KIF25-AS1Q9Y6Z4 181 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 CUX2O14529 1486 aa2.94□□□□□ -1.94
TOPBP1-204ENST00000505804 IGKV6D-41A0A0C4DH26 115 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 FBLL1A6NHQ2 334 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 A8MU10 97 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 RASGRF2O14827 1237 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 PPIHO43447 177 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 NUDT21O43809 227 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 LY6G6DO95868 133 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 JCHAINP01591 159 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 H2AFZP0C0S5 128 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 P0C879 139 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 FUT1P19526 365 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 CCNA2P20248 432 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 ZBTB25P24278 435 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 PTBP1P26599 531 aaKnown RBP eCLIP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 PRKAR2BP31323 418 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 CDH5P33151 784 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 TFDP1Q14186 410 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 CEBPEQ15744 281 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 CDC37Q16543 378 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 TTC31Q49AM3 519 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 MEDAGQ5VYS4 303 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 ZNF57Q68EA5 555 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 RAET1GQ6H3X3 334 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 IRGCQ6NXR0 463 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 ZCCHC12Q6PEW1 402 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 CNSTQ6PJW8 725 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 LPCAT2Q7L5N7 544 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 FBXO16Q8IX29 292 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 GPR137CQ8N3F9 429 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 ADAMTS16Q8TE57 1224 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 ELMO2Q96JJ3 720 aa2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 YTHDF1Q9BYJ9 559 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 RPAP3Q9H6T3 665 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 RAI1Q7Z5J4 1906 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-204ENST00000505804 RNF222A6NCQ9 220 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 PDXKO00764 312 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 TM9SF1O15321 606 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 ANXA4P09525 319 aaPredicted RBP2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 IGHV1-2P23083 117 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 IL1RL1Q01638 556 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 PRKCEQ02156 737 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 PLOD1Q02809 727 aaPredicted RBP2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 EXOSC2Q13868 293 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 KIAA0040Q15053 153 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 CYP51A1Q16850 503 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 GLYR1Q49A26 553 aaPredicted RBP2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 CYBRD1Q53TN4 286 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 TOR1AIP1Q5JTV8 583 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 RBM43Q6ZSC3 357 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 C9orf40Q8IXQ3 194 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 GPR65Q8IYL9 337 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 UBQLNLQ8IYU4 475 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 CSNK1A1LQ8N752 337 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 C14orf79Q96F83 325 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 MAPKAP1Q9BPZ7 522 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 TSSK1BQ9BXA7 367 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 KRT23Q9C075 422 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 C1orf21Q9H246 121 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 NGBQ9NPG2 151 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 C1orf123Q9NWV4 160 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 CLCA3PQ9Y6N3 262 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 ZNF318Q5VUA4 2279 aa2.92□□□□□ -1.94
TOPBP1-204ENST00000505804 E7ENQ6 273 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 TNFSF11O14788 317 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 LATO43561 262 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 PRPSAP2O60256 369 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 APBB3O95704 486 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 CA3P07451 260 aa2.91□□□□□ -1.94
TOPBP1-204ENST00000505804 RRASP10301 218 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms