RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MFSD6LQ8IWD5 586 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KREMEN2Q8NCW0 462 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BVESQ8NE79 360 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CCDC107Q8WV48 283 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 EPYCQ99645 322 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM43Q9BTV4 400 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TAPBPLQ9BX59 468 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HDAC8Q9BY41 377 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 OR51E2Q9H255 320 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SMDT1Q9H4I9 107 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 POMKQ9H5K3 350 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MRPS30Q9NP92 439 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MID1IP1Q9NPA3 183 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF282Q9UDV7 671 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 A0A096LPI6 279 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 A0A1W2PRB8 838 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HYKKA2RU49 373 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 H3BQ06 376 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 FOXE1O00358 373 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PER2O15055 1255 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SSNA1O43805 119 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 IFNA2P01563 188 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SULT1A3P0DMM9 295 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SULT1A4P0DMN0 295 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HLA-GP17693 338 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HLA-DPA1P20036 260 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NPR2P20594 1047 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NFYAP23511 347 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ATP5A1P25705 553 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 LIPAP38571 399 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RPL35P42766 123 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HNMTP50135 292 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KCNQ1P51787 676 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PNLIPRP1P54315 467 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MAZP56270 477 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SCAND1P57086 179 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 STARD6P59095 220 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RACK1P63244 317 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CCINQ13939 588 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TOMM34Q15785 309 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 VMACQ2NL98 169 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GLYR1Q49A26 553 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 FHL5Q5TD97 284 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ABHD13Q7L211 337 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CXXC5Q7LFL8 322 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PTGR2Q8N8N7 351 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 POGLUT1Q8NBL1 392 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 OR5T1Q8NG75 326 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HASPINQ8TF76 798 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ACOT11Q8WXI4 607 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MARC2Q969Z3 335 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC25A46Q96AG3 418 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC47A1Q96FL8 570 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BTF3L4Q96K17 158 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC38A3Q99624 504 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PAPOLGQ9BWT3 736 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC38A1Q9H2H9 487 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TUBA4BQ9H853 241 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 LINC00574Q9H8X3 128 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HAO2Q9NYQ3 351 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KCMF1Q9P0J7 381 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ABRACLQ9P1F3 81 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CES1P1Q9UKY3 287 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 EXOSC1Q9Y3B2 195 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 DNAJC15Q9Y5T4 150 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 A0A1B0GUH1 482 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HIDE1A8MVS5 230 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 DSCR3O14972 297 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 SUV39H1O43463 412 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PCDHGA12O60330 932 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 KERAO60938 352 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 SH3BGRLO75368 114 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 WBP4O75554 376 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 S1PR4O95977 384 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 FABP3P05413 133 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 GALTP07902 379 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 STSP08842 583 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CLUP10909 449 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 IFI30P13284 250 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CD46P15529 392 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PAX1P15863 534 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CSNK1EP49674 416 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 RENBPP51606 427 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 AFF1P51825 1210 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ARHGDIBP52566 201 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PFN3P60673 137 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 RAB8AP61006 207 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 MRPS6P82932 125 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HOXC5Q00444 222 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CNTN1Q12860 1018 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TRAM2Q15035 370 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 AP5B1Q2VPB7 878 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 C3orf38Q5JPI3 329 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 AADACL4Q5VUY2 407 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 AWAT2Q6E213 333 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 USP53Q70EK8 1073 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ADIPOR2Q86V24 386 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CYP4Z1Q86W10 505 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF565Q8N9K5 539 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 DNAAF1Q8NEP3 725 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms