RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 A0A1B0GTL3 188 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 A8MT66 165 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 B4DXG7 233 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 MANBAO00462 879 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 SIAH2O43255 324 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 SOX30O94993 753 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 IL33O95760 270 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 POU2F1P14859 743 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 PCSK2P16519 638 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 TAC1P20366 129 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 DDCP20711 480 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 PRPH2P23942 346 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 IL12BP29460 328 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 TIA1P31483 386 aaKnown RBP eCLIP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 CCKARP32238 428 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 EVI2BP34910 448 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 MAP3K8P41279 467 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 CLK3P49761 638 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 AGFG1P52594 562 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 NR1H2P55055 460 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 PKNOX1P55347 436 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 CLDN15P56746 228 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 RAE1P78406 368 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 MRPS35P82673 323 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 PRR5P85299 388 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM27E3Q08E93 113 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 TRADDQ15628 312 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 BEX5Q5H9J7 111 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF678Q5SXM1 525 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 DESI1Q6ICB0 168 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 VWA1Q6PCB0 445 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 NPSR1Q6W5P4 371 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 RNF165Q6ZSG1 346 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 IKBIPQ70UQ0 350 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 LARP4Q71RC2 724 aaKnown RBP eCLIP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 BTLAQ7Z6A9 289 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 CCDC25Q86WR0 208 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 SLC22A9Q8IVM8 553 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 CCDC116Q8IYX3 515 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM9CQ8IZT9 166 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 GCNT2Q8N0V5 402 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 OR2L13Q8N349 312 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 C1orf52Q8N6N3 182 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 ADCY4Q8NFM4 1077 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 OR6K3Q8NGY3 331 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 UHMK1Q8TAS1 419 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 ACMSDQ8TDX5 336 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 ACTRT2Q8TDY3 377 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 DOK4Q8TEW6 326 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 ROBO4Q8WZ75 1007 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 GFM2Q969S9 779 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 CCDC126Q96EE4 140 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 PHF21BQ96EK2 531 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 L3HYPDHQ96EM0 354 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 GMPPAQ96IJ6 420 aaPredicted RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF845Q96IR2 970 aaPredicted RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 NSUN5Q96P11 429 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 PAFAH2Q99487 392 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 TMEM204Q9BSN7 226 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 GRIP2Q9C0E4 1043 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 VPS11Q9H270 941 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF395Q9H8N7 513 aaPredicted RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 FOLH1BQ9HBA9 442 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 C3orf14Q9HBI5 128 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 FARSBQ9NSD9 589 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 NINJ2Q9NZG7 142 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 NTMQ9P121 344 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 PPP4R1LQ9P1A2 415 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 DKKL1Q9UK85 242 aa5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 CHD3Q12873 2000 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 A0A1W2PQD3 144 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 OR2M5A3KFT3 312 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ALG1L2C9J202 215 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 PPP6CO00743 305 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ADAMDEC1O15204 470 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 PCDH7O60245 1069 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 TBX19O60806 448 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 SS18L1O75177 396 aaPredicted RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 OR4F21O95013 312 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ESRRBO95718 433 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 HSPA4LO95757 839 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 LY6G6DO95868 133 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 THBS1P07996 1170 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 GSTA1P08263 222 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 IL3P08700 152 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ABHD2P08910 425 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 SNRPAP09012 282 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 NID1P14543 1247 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 HK1P19367 917 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 PSMB1P20618 241 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 TBXA2RP21731 343 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 ARL1P40616 181 aaPredicted RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 STARP49675 285 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 SUCLG1P53597 346 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 PRKAA2P54646 552 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 CDH13P55290 713 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 CORO7P57737 925 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 MRPS25P82663 173 aaKnown RBP5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 SRYQ05066 204 aa5.49□□□□□ -1.53
LSM3P4-201ENST00000502948 CKAP4Q07065 602 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms