RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 NECTIN3Q9NQS3 549 aa16.96■□□□□ 0.31
LINC00535-201ENST00000501400 DHCR7Q9UBM7 475 aaKnown RBP16.96■□□□□ 0.31
LINC00535-201ENST00000501400 MGAT4BQ9UQ53 548 aa16.96■□□□□ 0.31
LINC00535-201ENST00000501400 IFT52Q9Y366 437 aa16.96■□□□□ 0.31
LINC00535-201ENST00000501400 NPIPA5A0A0B4J1W7 369 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 NPIPA7E9PJI5 369 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 CLDN4O14493 209 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 THBS1P07996 1170 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 NPIPA8P0DM63 369 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 CHMP24386 653 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 GABRA3P34903 492 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 ARL4DP49703 201 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 CXCR4P61073 352 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 HOXC5Q00444 222 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 GPR68Q15743 365 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 NEDD8Q15843 81 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 PROX2Q3B8N5 592 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 PERM1Q5SV97 790 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 FIGNL1Q6PIW4 674 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 PEX5LQ8IYB4 626 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 VSTM2LQ96N03 204 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 DGAT2Q96PD7 388 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 DUSP23Q9BVJ7 150 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 NTNG1Q9Y2I2 539 aa16.96■□□□□ 0.3
LINC00535-201ENST00000501400 ZAR1LA6NP61 321 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 PEX12O00623 359 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 BRINP1O60477 761 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 STX11O75558 287 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 MSL3P1P0C860 447 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 OR1D4P47884 311 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 RGS8P57771 180 aaPredicted RBP16.95■□□□□ 0.3
LINC00535-201ENST00000501400 SLC35A2P78381 396 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 POU6F2P78424 691 aaPredicted RBP16.95■□□□□ 0.3
LINC00535-201ENST00000501400 PLAURQ03405 335 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 RAB39AQ14964 217 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 ZBED5Q49AG3 693 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 GPR141Q7Z602 305 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 KMT5CQ86Y97 462 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 CCDC103Q8IW40 242 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 RBM18Q96H35 190 aaKnown RBP16.95■□□□□ 0.3
LINC00535-201ENST00000501400 DGCR6LQ9BY27 220 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 ZNF768Q9H5H4 540 aaKnown RBP16.95■□□□□ 0.3
LINC00535-201ENST00000501400 SEMA4GQ9NTN9 838 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 SLC13A4Q9UKG4 626 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 SLC6A14Q9UN76 642 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 HEMK1Q9Y5R4 338 aaPredicted RBP16.95■□□□□ 0.3
LINC00535-201ENST00000501400 SEC16AO15027 2179 aa16.95■□□□□ 0.3
LINC00535-201ENST00000501400 CPSF4LA6NMK7 179 aaKnown RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 M0R129 80 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 SIGLEC6O43699 453 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 AK1P00568 194 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 TP53P04637 393 aaPredicted RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 JUNBP17275 347 aaPredicted RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 GABRB1P18505 474 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 GSTT1P30711 240 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 UGT2B15P54855 530 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ESRRGP62508 458 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 PTGES3Q15185 160 aaKnown RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ZNF574Q6ZN55 896 aaPredicted RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 OR4K5Q8NGD3 323 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ZNF501Q96CX3 271 aaPredicted RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 NMD3Q96D46 503 aaKnown RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 MVB12AQ96EY5 273 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 UCK2Q9BZX2 261 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 DUSP21Q9H596 190 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 TRIM45Q9H8W5 580 aaPredicted RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ZNF226Q9NYT6 803 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ATXN7L1Q9ULK2 861 aaPredicted RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 CCDC160A6NGH7 325 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 PTGES3LE9PB15 166 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 KCNK2O95069 426 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 NTN1O95631 604 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 CLPSP04118 112 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 THY1P04216 161 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 IGFBP1P08833 259 aaPredicted RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 PNLIPP16233 465 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 MMP11P24347 488 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 IDH2P48735 452 aaKnown RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ZNF136P52737 540 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 EFNA3P52797 238 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 CRISP1P54107 249 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 TAS2R41P59536 307 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 LARS2Q15031 903 aaKnown RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 NR0B2Q15466 257 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 TMEM236Q5W0B7 351 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 AP1ARQ63HQ0 302 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ZC3H14Q6PJT7 736 aaKnown RBP16.94■□□□□ 0.3
LINC00535-201ENST00000501400 NPSR1Q6W5P4 371 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ZER1Q7Z7L7 766 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 FANCEQ9HB96 536 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 CAPN10Q9HC96 672 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 KLHL28Q9NXS3 571 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ENOPH1Q9UHY7 261 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 ERVK-19Q9WJR5 959 aa16.94■□□□□ 0.3
LINC00535-201ENST00000501400 WDFY4Q6ZS81 3184 aa16.93■□□□□ 0.3
LINC00535-201ENST00000501400 PATE3B3GLJ2 98 aa16.93■□□□□ 0.3
LINC00535-201ENST00000501400 SOX14O95416 240 aa16.93■□□□□ 0.3
LINC00535-201ENST00000501400 IGKV1D-16P01601 117 aa16.93■□□□□ 0.3
LINC00535-201ENST00000501400 CFIP05156 583 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms