RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 USF3Q68DE3 2245 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 OR2M5A3KFT3 312 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 LINC01387J3KSC0 135 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 PHF1O43189 567 aaPredicted RBP12.5□□□□□ -0.41
CCDC58-207ENST00000498466 AQP8O94778 261 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 F12P00748 615 aaPredicted RBP12.5□□□□□ -0.41
CCDC58-207ENST00000498466 ACVR1BP36896 505 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 CTBP2P56545 445 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 PSPHP78330 225 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 MRPS22P82650 360 aaKnown RBP12.5□□□□□ -0.41
CCDC58-207ENST00000498466 STX5Q13190 355 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 ACAP2Q15057 778 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 ERCC6LQ2NKX8 1250 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 ZNF628Q5EBL2 1059 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 NPSR1Q6W5P4 371 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 CCDC116Q8IYX3 515 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 METTL25Q8N6Q8 603 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 KAT2AQ92830 837 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 TM4SF18Q96CE8 201 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 ZNF681Q96N22 645 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 ELOVL6Q9H5J4 265 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 PTGES2Q9H7Z7 377 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 UTS2RQ9UKP6 389 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 CLEC4AQ9UMR7 237 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 OR10H1Q9Y4A9 318 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 HEATR5AQ86XA9 2040 aa12.5□□□□□ -0.41
CCDC58-207ENST00000498466 ANK2Q01484 3957 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 CCDC189A1A4V9 331 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 A8MV72 311 aaPredicted RBP12.49□□□□□ -0.41
CCDC58-207ENST00000498466 OVOL3O00110 214 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 EIF3HO15372 352 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC58-207ENST00000498466 ESRRBO95718 433 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 CDKN1AP38936 164 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 EIF1AXP47813 144 aaKnown RBP12.49□□□□□ -0.41
CCDC58-207ENST00000498466 GALNT1Q10472 559 aaPredicted RBP12.49□□□□□ -0.41
CCDC58-207ENST00000498466 METTL2BQ6P1Q9 378 aaKnown RBP12.49□□□□□ -0.41
CCDC58-207ENST00000498466 KLC3Q6P597 504 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 SLC44A2Q8IWA5 706 aaPredicted RBP12.49□□□□□ -0.41
CCDC58-207ENST00000498466 OR4N2Q8NGD1 307 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 OR9A2Q8NGT5 310 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 UHMK1Q8TAS1 419 aaKnown RBP12.49□□□□□ -0.41
CCDC58-207ENST00000498466 RAB3IL1Q8TBN0 382 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 ZNF675Q8TD23 568 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 FBXW5Q969U6 566 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 VSTM2LQ96N03 204 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 TACO1Q9BSH4 297 aaKnown RBP12.49□□□□□ -0.41
CCDC58-207ENST00000498466 SLCO5A1Q9H2Y9 848 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 FOLH1BQ9HBA9 442 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 SDHAF3Q9NRP4 125 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 AP4B1Q9Y6B7 739 aa12.49□□□□□ -0.41
CCDC58-207ENST00000498466 CLOCKO15516 846 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 ADAM11O75078 769 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 C2P06681 752 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 SOD3P08294 240 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 GSTA2P09210 222 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 SLC6A8P48029 635 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 CALCOCO2Q13137 446 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 CTU2Q2VPK5 515 aaKnown RBP12.48□□□□□ -0.41
CCDC58-207ENST00000498466 SH2D4BQ5SQS7 431 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 BEND4Q6ZU67 534 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 CCDC91Q7Z6B0 441 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 STK32CQ86UX6 486 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 PTGR2Q8N8N7 351 aaPredicted RBP12.48□□□□□ -0.41
CCDC58-207ENST00000498466 ERP27Q96DN0 273 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 PHF21BQ96EK2 531 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 C1GALT1C1Q96EU7 318 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 GMPPAQ96IJ6 420 aaPredicted RBP12.48□□□□□ -0.41
CCDC58-207ENST00000498466 NTMT1Q9BV86 223 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 DPH5Q9H2P9 285 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 FARSBQ9NSD9 589 aaKnown RBP12.48□□□□□ -0.41
CCDC58-207ENST00000498466 SENP1Q9P0U3 644 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 LIPT1Q9Y234 373 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 GPR52Q9Y2T5 361 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 RNF115Q9Y4L5 304 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 MAGED1Q9Y5V3 778 aaPredicted RBP12.48□□□□□ -0.41
CCDC58-207ENST00000498466 ROS1P08922 2347 aa12.48□□□□□ -0.41
CCDC58-207ENST00000498466 CCDC188H7C350 402 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 EIF1AYO14602 144 aaKnown RBP12.47□□□□□ -0.41
CCDC58-207ENST00000498466 GMFGO60234 142 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 SS18L1O75177 396 aaPredicted RBP12.47□□□□□ -0.41
CCDC58-207ENST00000498466 KLHL2O95198 593 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 FAM157CP0CG43 387 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 MRPS25P82663 173 aaKnown RBP12.47□□□□□ -0.41
CCDC58-207ENST00000498466 FAPQ12884 760 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 ZNF155Q12901 538 aaPredicted RBP12.47□□□□□ -0.41
CCDC58-207ENST00000498466 TRAF3Q13114 568 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 LGSNQ5TDP6 509 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 MROH9Q5TGP6 573 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 ADAM5Q6NVV9 412 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 CREG2Q8IUH2 290 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 C1orf52Q8N6N3 182 aaKnown RBP12.47□□□□□ -0.41
CCDC58-207ENST00000498466 LILRB1Q8NHL6 650 aaPredicted RBP12.47□□□□□ -0.41
CCDC58-207ENST00000498466 FBF1Q8TES7 1133 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 DUSP19Q8WTR2 217 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 SMAP2Q8WU79 429 aaPredicted RBP12.47□□□□□ -0.41
CCDC58-207ENST00000498466 SELENOMQ8WWX9 145 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 MTBPQ96DY7 904 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 NSUN5Q96P11 429 aaKnown RBP12.47□□□□□ -0.41
CCDC58-207ENST00000498466 OR10A4Q9H209 315 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms