RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	KLRF1	Q9NZS2	232 aa		11.31	□□□□□ -0.6
MRPL55-233	ENST00000495899	TINAG	Q9UJW2	476 aa		11.31	□□□□□ -0.6
MRPL55-233	ENST00000495899	C15orf41	Q9Y2V0	281 aa		11.31	□□□□□ -0.6
MRPL55-233	ENST00000495899	MEMO1	Q9Y316	297 aa		11.31	□□□□□ -0.6
MRPL55-233	ENST00000495899	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	RNASET2	O00584	256 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	ANKRD28	O15084	1053 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	LILRA1	O75019	489 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	KCNH1	O95259	989 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	TPO	P07202	933 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	CELA3A	P09093	270 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	RNF224	P0DH78	156 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	KIT	P10721	976 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	AGA	P20933	346 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	GDF1	P27539	372 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	PTPN6	P29350	595 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	LCN1	P31025	176 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	GABRA3	P34903	492 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	PTGDS	P41222	190 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	CCT3	P49368	545 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	PRIM2	P49643	509 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	CLNS1A	P54105	237 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	DPY19L1	Q2PZI1	675 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	GXYLT1	Q4G148	440 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	EXOSC6	Q5RKV6	272 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	ANXA8L1	Q5VT79	327 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	MFSD12	Q6NUT3	480 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	BHLHB9	Q6PI77	547 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	OR56A1	Q8NGH5	318 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	NEIL3	Q8TAT5	605 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	SFXN5	Q8TD22	340 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	GPR151	Q8TDV0	419 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	LRRC8C	Q8TDW0	803 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	ACTRT2	Q8TDY3	377 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	PHF10	Q8WUB8	498 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	SARAF	Q96BY9	339 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	FAM120B	Q96EK7	910 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	GIMAP5	Q96F15	307 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	MAEL	Q96JY0	434 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	TP63	Q9H3D4	680 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	ACBD3	Q9H3P7	528 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	HHATL	Q9HCP6	504 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	MARCO	Q9UEW3	520 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	PCDHGB4	Q9UN71	923 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	ABCG2	Q9UNQ0	655 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	PCDHGB3	Q9Y5G1	929 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	SNX8	Q9Y5X2	465 aa		11.3	□□□□□ -0.6
MRPL55-233	ENST00000495899	USP9Y	O00507	2555 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	PRSS51	A0A1B0GVH4	220 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	NPIPA2	E9PIF3	369 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	NPIPA3	F8WFD2	350 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	FADS1	O60427	444 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	ZG16	O60844	167 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	TGDS	O95455	350 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	C6orf47	O95873	294 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	HMGN2	P05204	90 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	KRT16	P08779	473 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	HOXD4	P09016	255 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	ALOX5	P09917	674 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	GP1BB	P13224	206 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	CYP4B1	P13584	511 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	EFNA1	P20827	205 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	EPHA3	P29320	983 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	KIR3DL1	P43629	444 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	CLK3	P49761	638 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	SMS	P52788	366 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	PPP2R2A	P63151	447 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	SPDYE7P	Q495Y7	208 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	XKRX	Q6PP77	449 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	ANGPTL8	Q6UXH0	198 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	PLCZ1	Q86YW0	608 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	WDSUB1	Q8N9V3	476 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	SLC16A11	Q8NCK7	471 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	FAM110B	Q8TC76	370 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	NUDT8	Q8WV74	236 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	HPS1	Q92902	700 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	EFHD2	Q96C19	240 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	ITPKC	Q96DU7	683 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	CCDC120	Q96HB5	630 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	DMRTA2	Q96SC8	542 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	STAC	Q99469	402 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	EXO5	Q9H790	373 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	CXorf36	Q9H7Y0	433 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	GALNT9	Q9HCQ5	603 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	EQTN	Q9NQ60	294 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	SDHAF3	Q9NRP4	125 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	DUSP22	Q9NRW4	184 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	INTS9	Q9NV88	658 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	AIG1	Q9NVV5	245 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	FAM120C	Q9NX05	1096 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	SH3BGRL2	Q9UJC5	107 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	ACAD8	Q9UKU7	415 aa		11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-233	ENST00000495899	DOPEY1	Q5JWR5	2465 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	GOLGA8Q	A0A0J9YX86	632 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	GOLGA8O	A6NCC3	632 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	GOLGA8N	F8WBI6	632 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	ZNF195	O14628	629 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms