RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SNTA1Q13424 505 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 GSG1Q2KHT4 349 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 FAM27D1Q5T7N8 215 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 KIAA1161Q6NSJ0 714 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 AMER3Q8N944 861 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 PPP1R16AQ96I34 528 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 FOPNLQ96NB1 174 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 F2RL3Q96RI0 385 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 ACAT2Q9BWD1 397 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 BTBD1Q9H0C5 482 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 CDCP1Q9H5V8 836 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 BCL2L10Q9HD36 194 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 NPTNQ9Y639 398 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 A8MUA0 341 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 HOXD4P09016 255 aaPredicted RBP14.39□□□□□ -0.11
SDF4-207ENST00000494748 GNSP15586 552 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 SHC1P29353 583 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 HTR1FP30939 366 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 CAP1Q01518 475 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 RPA4Q13156 261 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 KHDRBS2Q5VWX1 349 aaKnown RBP14.39□□□□□ -0.11
SDF4-207ENST00000494748 LYPD4Q6UWN0 246 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.39□□□□□ -0.11
SDF4-207ENST00000494748 MS4A8Q9BY19 250 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 SEMA4GQ9NTN9 838 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 NUBP2Q9Y5Y2 271 aa14.39□□□□□ -0.11
SDF4-207ENST00000494748 LOC105369274A0A096LPK9 316 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 TEX13CA0A0J9YWL9 993 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 FAM170BA6NMN3 283 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 SOCS6O14544 535 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 DHFRP00374 187 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 SHC2P98077 582 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 CNTN1Q12860 1018 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 KIAA1324Q6UXG2 1013 aaKnown RBP14.38□□□□□ -0.11
SDF4-207ENST00000494748 OR4N4Q8N0Y3 316 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 HAVCR2Q8TDQ0 301 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 DIO2Q92813 273 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 YIPF5Q969M3 257 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 EXOSC8Q96B26 276 aaKnown RBP14.38□□□□□ -0.11
SDF4-207ENST00000494748 IL17FQ96PD4 163 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 SLC38A2Q96QD8 506 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 QRSL1Q9H0R6 528 aaKnown RBP14.38□□□□□ -0.11
SDF4-207ENST00000494748 RHBGQ9H310 441 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 DDX31Q9H8H2 851 aaKnown RBP14.38□□□□□ -0.11
SDF4-207ENST00000494748 CHST10O43529 356 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 THY1P04216 161 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 CTSLP07711 333 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 ADGRG3Q86Y34 549 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 SAMD12Q8N8I0 201 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 GALNT11Q8NCW6 608 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 CEP76Q8TAP6 659 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 XAGE5Q8WWM1 108 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 RASD1Q9Y272 281 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 TSPAN11A1L157 253 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 POLR2LP62875 67 aaKnown RBP14.38□□□□□ -0.11
SDF4-207ENST00000494748 BDH1Q02338 343 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 ZNF267Q14586 743 aaPredicted RBP14.38□□□□□ -0.11
SDF4-207ENST00000494748 MLC1Q15049 377 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 WASH2PQ6VEQ5 465 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 GAREM2Q75VX8 874 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 UBE3DQ7Z6J8 389 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 LHFPL5Q8TAF8 219 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 ZFPM2Q8WW38 1151 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 KLK6Q92876 244 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 TOE1Q96GM8 510 aaKnown RBP14.38□□□□□ -0.11
SDF4-207ENST00000494748 ZNF764Q96H86 408 aaPredicted RBP14.38□□□□□ -0.11
SDF4-207ENST00000494748 UCKL1Q9NWZ5 548 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 SLC9A8Q9Y2E8 581 aa14.38□□□□□ -0.11
SDF4-207ENST00000494748 GLTPD2A6NH11 291 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 CASC3O15234 703 aaKnown RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 ANKRD34CP0C6C1 535 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 ACADLP28330 430 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 TRHRP34981 398 aaPredicted RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 PTGS2P35354 604 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 CFAP206Q8IYR0 622 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 ZNF689Q96CS4 500 aaPredicted RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 SLC35G5Q96KT7 338 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 KLHL15Q96M94 604 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 REG4Q9BYZ8 158 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 GLIPR2Q9H4G4 154 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 IL20Q9NYY1 176 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 HYAL3O43820 417 aaPredicted RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 NR2F1P10589 423 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 DRD2P14416 443 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 RNF144AP50876 292 aaPredicted RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 DBPQ10586 325 aaPredicted RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 TJAP1Q5JTD0 557 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 SFXN4Q6P4A7 337 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 RTL4Q6ZR62 310 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 PRSS42Q7Z5A4 293 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 KCTD12Q96CX2 325 aaKnown RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 DPAGT1Q9H3H5 408 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 HINT3Q9NQE9 182 aaKnown RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 KCNE3Q9Y6H6 103 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 FRS3O43559 492 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 LZTS3O60299 673 aaPredicted RBP14.37□□□□□ -0.11
SDF4-207ENST00000494748 LEFTY1O75610 366 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 GIFP27352 417 aa14.37□□□□□ -0.11
SDF4-207ENST00000494748 PTGER1P34995 402 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms