RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 GCKRQ14397 625 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 PCK2Q16822 640 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 CYBRD1Q53TN4 286 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 CAVIN4Q5BKX8 364 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 TCHHL1Q5QJ38 904 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 BEND6Q5SZJ8 279 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 CHMP1BQ7LBR1 199 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 SERINC5Q86VE9 423 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 TBC1D10CQ8IV04 446 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 POC1AQ8NBT0 407 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 TRPV1Q8NER1 839 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 OR6C4Q8NGE1 309 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 OR9Q2Q8NGE9 314 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 RPLP0P6Q8NHW5 317 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 RAB3IL1Q8TBN0 382 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 AGR3Q8TD06 166 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 FAM3CQ92520 227 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 SLCO2A1Q92959 643 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 SH3YL1Q96HL8 342 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 ZNF479Q96JC4 524 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 USP28Q96RU2 1077 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 APOOQ9BUR5 198 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 C6orf106Q9H6K1 298 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 EXO5Q9H790 373 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 YY1AP1Q9H869 796 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 Q9HAA7 133 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 SMOXQ9NWM0 555 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 NLGN3Q9NZ94 848 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 THEGQ9P2T0 379 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 PSME2Q9UL46 239 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.82□□□□□ -1.8
GTF3A-208ENST00000493903 PIGLQ9Y2B2 252 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 SLC9A8Q9Y2E8 581 aa3.82□□□□□ -1.8
GTF3A-208ENST00000493903 TIAM1Q13009 1591 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 UGGT1Q9NYU2 1555 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 A0A075B6Q4 140 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 A0A0J9YVX5 310 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 ESYT2A0FGR8 921 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 A8MU76 341 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 SLCO1B7G3V0H7 640 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 CASC3O15234 703 aaKnown RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 INPP4BO15327 924 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 IGSF6O95976 241 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 IGHEP01854 428 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 RPLP0P05388 317 aaKnown RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 NGFRP08138 427 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 FGF4P08620 206 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 FOSL2P15408 326 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 TPSB2P20231 275 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 SRSF5Q13243 272 aaKnown RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 HNRNPDQ14103 355 aaKnown RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 ELAVL3Q14576 367 aaKnown RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 TPSAB1Q15661 275 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 GTDC1Q4AE62 458 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 PRAMEF5Q5TYX0 476 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 PRAMEF6Q5VXH4 476 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 NADSYN1Q6IA69 706 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 NEPROQ6NW34 567 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 ANGPTL8Q6UXH0 198 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 TMEM17Q86X19 198 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 LACC1Q8IV20 430 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 CHDHQ8NE62 594 aaPredicted RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 OR6S1Q8NH40 331 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 ZNF75CPQ92670 426 aaPredicted RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 RPL3LQ92901 407 aaKnown RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 MED30Q96HR3 178 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 RIT2Q99578 217 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 MTG1Q9BT17 334 aaPredicted RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 TRIM9Q9C026 710 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 COMMD4Q9H0A8 199 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 SLC25A51Q9H1U9 297 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 GPN2Q9H9Y4 310 aaPredicted RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 KCNK13Q9HB14 408 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 IL1RL2Q9HB29 575 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 DCAF13Q9NV06 445 aaKnown RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 C2orf42Q9NWW7 574 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 DUS2Q9NX74 493 aaKnown RBP3.81□□□□□ -1.8
GTF3A-208ENST00000493903 GALPQ9UBC7 116 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 GNG12Q9UBI6 72 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 SEC14L3Q9UDX4 400 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 CIDEBQ9UHD4 219 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 CYTH4Q9UIA0 394 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 LNPEPQ9UIQ6 1025 aa3.81□□□□□ -1.8
GTF3A-208ENST00000493903 MAP3K1Q13233 1512 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 DOCK7Q96N67 2140 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 COL3A1P02461 1466 aaPredicted RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 RTEL1-TNFRSF6BF6WH68 1400 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 MIA2Q96PC5 1412 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 TTC41PQ6P2S7 1318 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 IGHV4-4A0A075B6R2 117 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 ARHGEF35A5YM69 484 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 SNTNA6NMZ2 147 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 NPIPA7E9PJI5 369 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 LRRTM2O43300 516 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 TRMUO75648 421 aaKnown RBP3.8□□□□□ -1.8
GTF3A-208ENST00000493903 NPIPA8P0DM63 369 aa3.8□□□□□ -1.8
GTF3A-208ENST00000493903 ANXA3P12429 323 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms