RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 C19orf48Q6RUI8 117 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 FAM92BQ6ZTR7 304 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 ZNF655Q8N720 491 aaPredicted RBP12.97□□□□□ -0.33
TFE3-204ENST00000493583 ANKRD53Q8N9V6 530 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 OR11H7Q8NGC8 314 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 TEX47Q8TBZ9 253 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 ATF6BQ99941 703 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 RNF32Q9H0A6 362 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 IMP3Q9NV31 184 aaKnown RBP12.97□□□□□ -0.33
TFE3-204ENST00000493583 COL4A6Q14031 1691 aa12.97□□□□□ -0.33
TFE3-204ENST00000493583 SSNA1O43805 119 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 GKN3PP0CG01 181 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 SOX9P48436 509 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 PCBP3P57721 371 aaKnown RBP12.96□□□□□ -0.33
TFE3-204ENST00000493583 DUSP2Q05923 314 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 MLIPQ5VWP3 458 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 KCTD20Q7Z5Y7 419 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 NRMQ8IXM6 262 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 ABHD1Q96SE0 405 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 ZNF559Q9BR84 538 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 HCAR1Q9BXC0 346 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 TMEM245Q9H330 911 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 KLHL31Q9H511 634 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 MAPRE3Q9UPY8 281 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 TRAPPC4Q9Y296 219 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 NCKAP1Q9Y2A7 1128 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 IRAK3Q9Y616 596 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 LGALS8O00214 317 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 POP7O75817 140 aaKnown RBP12.96□□□□□ -0.33
TFE3-204ENST00000493583 ADAP00813 363 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 COX10Q12887 443 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 LTB4RQ15722 352 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 PLEKHS1Q5SXH7 462 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 MZT2BQ6NZ67 158 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 TMEFF1Q8IYR6 380 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 ARL14Q8N4G2 192 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 ZBTB44Q8NCP5 570 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 VN1R2Q8NFZ6 395 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 OR8K5Q8NH50 307 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 GLYATL1Q969I3 302 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
TFE3-204ENST00000493583 SPATA9Q9BWV2 254 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 OR6C2Q9NZP2 312 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 ATPIF1Q9UII2 106 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 ALPK3Q96L96 1907 aa12.96□□□□□ -0.33
TFE3-204ENST00000493583 AGAP14A8MT82 685 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 ORC5O43913 435 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 LCMT2O60294 686 aaKnown RBP12.96□□□□□ -0.34
TFE3-204ENST00000493583 SNRPBP14678 240 aaKnown RBP12.96□□□□□ -0.34
TFE3-204ENST00000493583 PSMA3P25788 255 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 TRHRP34981 398 aaPredicted RBP12.96□□□□□ -0.34
TFE3-204ENST00000493583 UBE2MP61081 183 aaKnown RBP12.96□□□□□ -0.34
TFE3-204ENST00000493583 KLHL22Q53GT1 634 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 BHLHB9Q6PI77 547 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 LYPD4Q6UWN0 246 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 CFAP77Q6ZQR2 320 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.34
TFE3-204ENST00000493583 SIRT6Q8N6T7 355 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 SETD6Q8TBK2 473 aa12.96□□□□□ -0.34
TFE3-204ENST00000493583 THAP7Q9BT49 309 aaPredicted RBP12.96□□□□□ -0.34
TFE3-204ENST00000493583 CHURC1-FNTBB4DL54 471 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 MRPS14O60783 128 aaKnown RBP12.95□□□□□ -0.34
TFE3-204ENST00000493583 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
TFE3-204ENST00000493583 EPPINO95925 133 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 HMGN2P05204 90 aaKnown RBP12.95□□□□□ -0.34
TFE3-204ENST00000493583 CHRM4P08173 479 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 GRPRP30550 384 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 SLC1A3P43003 542 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 E2F1Q01094 437 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 NTRK2Q16620 822 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 ZNF628Q5EBL2 1059 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 CPA6Q8N4T0 437 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 GDPD1Q8N9F7 314 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 TMEM255BQ8WV15 326 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 SAMD8Q96LT4 415 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 BBS4Q96RK4 519 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 C1QTNF7Q9BXJ2 289 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 RBCK1Q9BYM8 510 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 SPRTNQ9H040 489 aaPredicted RBP12.95□□□□□ -0.34
TFE3-204ENST00000493583 SLC25A13Q9UJS0 675 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 MN1Q10571 1320 aaPredicted RBP12.95□□□□□ -0.34
TFE3-204ENST00000493583 IQCMA0A1B0GVH7 501 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 J3QLW9 94 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 SOCS5O75159 536 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 SLCO2B1O94956 709 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 ALPPP05187 535 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 ZNF19P17023 458 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 C19orf57Q0VDD7 668 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 ODF4Q2M2E3 257 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 PLK5Q496M5 336 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 ZC3H14Q6PJT7 736 aaKnown RBP12.95□□□□□ -0.34
TFE3-204ENST00000493583 METTL2AQ96IZ6 378 aaKnown RBP12.95□□□□□ -0.34
TFE3-204ENST00000493583 TMEM175Q9BSA9 504 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 SAV1Q9H4B6 383 aaPredicted RBP12.95□□□□□ -0.34
TFE3-204ENST00000493583 SEMA4GQ9NTN9 838 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 SLC13A4Q9UKG4 626 aa12.95□□□□□ -0.34
TFE3-204ENST00000493583 PITPNM1O00562 1244 aa12.94□□□□□ -0.34
TFE3-204ENST00000493583 IL1AP01583 271 aa12.94□□□□□ -0.34
TFE3-204ENST00000493583 TIMP2P16035 220 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms