RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 EEFSECP57772 596 aaKnown RBP12.39□□□□□ -0.43
MSH6-208ENST00000493177 DCAF7P61962 342 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 MRPL49Q13405 166 aaKnown RBP12.39□□□□□ -0.43
MSH6-208ENST00000493177 DUSP5Q16690 384 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 IGFL2Q6UWQ7 119 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 NPSR1Q6W5P4 371 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 C16orf62Q7Z3J2 963 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 LGI4Q8N135 537 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 C10orf111Q8N326 155 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 CATSPER1Q8NEC5 780 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 OR8K3Q8NH51 312 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 NUBPLQ8TB37 319 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 MIPOL1Q8TD10 442 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 PIK3R3Q92569 461 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 CDS1Q92903 461 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 SLC35A4Q96G79 324 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 LCORQ96JN0 433 aaPredicted RBP12.39□□□□□ -0.43
MSH6-208ENST00000493177 ZNF354BQ96LW1 612 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 STACQ99469 402 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 KCTD14Q9BQ13 255 aaPredicted RBP12.39□□□□□ -0.43
MSH6-208ENST00000493177 PIGUQ9H490 435 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 ALG2Q9H553 416 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 THUMPD1Q9NXG2 353 aaKnown RBP12.39□□□□□ -0.43
MSH6-208ENST00000493177 STMN3Q9NZ72 180 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 ABCD2Q9UBJ2 740 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 P2RX2Q9UBL9 471 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 PCDHGB3Q9Y5G1 929 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 GMEB1Q9Y692 573 aa12.39□□□□□ -0.43
MSH6-208ENST00000493177 TRAV17A0A0B4J275 112 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 GXYLT2A0PJZ3 443 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 FRG2CA6NGY1 282 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 FAM220BPB1ANY3 271 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 C5orf58C9J3I9 102 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 WWP2O00308 870 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 GSTA4O15217 222 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 GSC2O15499 205 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 ASNA1O43681 348 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 DNAJA2O60884 412 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 PDE5AO76074 875 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 NKX2-2O95096 273 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 NR2F1P10589 423 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 MAN2A2P49641 1150 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 GSK3BP49841 420 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 POU6F2P78424 691 aaPredicted RBP12.38□□□□□ -0.43
MSH6-208ENST00000493177 HPCAP84074 193 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 EIF2S3LQ2VIR3 472 aaKnown RBP12.38□□□□□ -0.43
MSH6-208ENST00000493177 GPAT3Q53EU6 434 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 FCRLBQ6BAA4 426 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 TAGAPQ8N103 731 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 ARHGAP24Q8N264 748 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 SLC5A8Q8N695 610 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 OR2T12Q8NG77 320 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 MAL2Q969L2 176 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 ADIPOR1Q96A54 375 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 RMND5BQ96G75 393 aaPredicted RBP12.38□□□□□ -0.43
MSH6-208ENST00000493177 CLPTM1LQ96KA5 538 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 BTBD9Q96Q07 612 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 SPATA9Q9BWV2 254 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 CADM1Q9BY67 442 aaKnown RBP12.38□□□□□ -0.43
MSH6-208ENST00000493177 NXF5Q9H1B4 397 aaKnown RBP12.38□□□□□ -0.43
MSH6-208ENST00000493177 CDCP1Q9H5V8 836 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 DUSP22Q9NRW4 184 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 GMPR2Q9P2T1 348 aaKnown RBP12.38□□□□□ -0.43
MSH6-208ENST00000493177 USP22Q9UPT9 525 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 GPR55Q9Y2T6 319 aaPredicted RBP12.38□□□□□ -0.43
MSH6-208ENST00000493177 KCNE3Q9Y6H6 103 aa12.38□□□□□ -0.43
MSH6-208ENST00000493177 GCN1Q92616 2671 aaKnown RBP12.38□□□□□ -0.43
MSH6-208ENST00000493177 BOD1L1Q8NFC6 3051 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 OR5H15A6NDH6 313 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 PRORSD1PA6NEY8 169 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 ANKUB1A6NFN9 424 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 A8MVJ9 347 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 TNFRSF21O75509 655 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 SOX30O94993 753 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 WDPCPO95876 746 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 BCHEP06276 602 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 CT45A8P0DMV1 189 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 CT45A9P0DMV2 189 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 DRD5P21918 477 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 TRHRP34981 398 aaPredicted RBP12.37□□□□□ -0.43
MSH6-208ENST00000493177 KRT20P35900 424 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 NRG3P56975 720 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 PSG6Q00889 435 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 CEACAM7Q14002 265 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 SCARB2Q14108 478 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 SYPL1Q16563 259 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 MEP1AQ16819 746 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 CT45A2Q5DJT8 189 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 DCST2Q5T1A1 773 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 CCNJQ5T5M9 372 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 ERICH5Q6P6B1 374 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 FIGNL1Q6PIW4 674 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 C16orf47Q6ZP98 133 aaPredicted RBP12.37□□□□□ -0.43
MSH6-208ENST00000493177 CALHM3Q86XJ0 350 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 ZZZ3Q8IYH5 903 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 PRR22Q8IZ63 422 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 C11orf65Q8NCR3 313 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 FAM156AQ8NDB6 213 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 TNIP2Q8NFZ5 429 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms