RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TDGF1P3P51864 188 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 CASP9P55211 416 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 RPS26P62854 115 aaKnown RBP12.8□□□□□ -0.36
CCM2-217ENST00000492883 FOXO1Q12778 655 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 SNTA1Q13424 505 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 EIF2S3LQ2VIR3 472 aaKnown RBP12.8□□□□□ -0.36
CCM2-217ENST00000492883 C6orf10Q5SRN2 563 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 CGB2Q6NT52 195 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 TMEM81Q6P7N7 255 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 FIGNL1Q6PIW4 674 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 BNC2Q6ZN30 1099 aaPredicted RBP12.8□□□□□ -0.36
CCM2-217ENST00000492883 MSANTD1Q6ZTZ1 278 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 GALNT10Q86SR1 603 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 SIAH3Q8IW03 269 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 OR52N2Q8NGI0 321 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 PRR7Q8TB68 274 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 CDS1Q92903 461 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 SLC35G5Q96KT7 338 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 ZNF317Q96PQ6 595 aaPredicted RBP12.8□□□□□ -0.36
CCM2-217ENST00000492883 OR7D2Q96RA2 312 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 GALNT9Q9HCQ5 603 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 DUSP22Q9NRW4 184 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 TMEM45AQ9NWC5 275 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 B4GALT7Q9UBV7 327 aa12.8□□□□□ -0.36
CCM2-217ENST00000492883 CHD6Q8TD26 2715 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 CPAMD8Q8IZJ3 1885 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 GNB5O14775 395 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 TRIM3O75382 744 aaPredicted RBP12.79□□□□□ -0.36
CCM2-217ENST00000492883 GLSO94925 669 aaPredicted RBP12.79□□□□□ -0.36
CCM2-217ENST00000492883 IGKV1D-16P01601 117 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 ATP6V1C1P21283 382 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 CDKN2CP42773 168 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 MAGEA5P43359 124 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 GYS2P54840 703 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 RBPJQ06330 500 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 SLC10A1Q14973 349 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 HYAL4Q2M3T9 481 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 EXOSC6Q5RKV6 272 aaKnown RBP12.79□□□□□ -0.36
CCM2-217ENST00000492883 CCNJQ5T5M9 372 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 SAXO2Q658L1 398 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 BLOC1S3Q6QNY0 202 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 FUNDC1Q8IVP5 155 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 GHDCQ8N2G8 530 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 FAM109AQ8N4B1 249 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 TMEM251Q8N6I4 163 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 OR5D16Q8NGK9 328 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 OR1J4Q8NGS1 313 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 FAM110BQ8TC76 370 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 SPDL1Q96EA4 605 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 TMEM41AQ96HV5 264 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 GNRHR2Q96P88 292 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 G6PC3Q9BUM1 346 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 OR51I1Q9H343 314 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 KLHL14Q9P2G3 628 aa12.79□□□□□ -0.36
CCM2-217ENST00000492883 LRRC3CA6NJW4 275 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 SCO2O43819 266 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 TRAPPC6AO75865 159 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 UTS2O95399 124 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 KRT75O95678 551 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 RFPL3SP0C7P2 107 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 HPGDP15428 266 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 GDF1P27539 372 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 EVI2BP34910 448 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 PTGDSP41222 190 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 TRPC1P48995 793 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 MAN2A2P49641 1150 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 RCAN2Q14206 197 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 TOMM20Q15388 145 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 CMPK2Q5EBM0 449 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 ATAD3BQ5T9A4 648 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 TIGD3Q6B0B8 471 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 SLC2A7Q6PXP3 512 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 DNAJC14Q6Y2X3 702 aaPredicted RBP12.78□□□□□ -0.36
CCM2-217ENST00000492883 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 XAGE5Q8WWM1 108 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 NEURL3Q96EH8 262 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 TBL1XR1Q9BZK7 514 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 LDAHQ9H6V9 325 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 EXO5Q9H790 373 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 SERHLQ9NQF3 203 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 SDHAF3Q9NRP4 125 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 EXD2Q9NVH0 621 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 FBXO34Q9NWN3 711 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 FLRT3Q9NZU0 649 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 OSGIN2Q9Y236 505 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 KCNE3Q9Y6H6 103 aa12.78□□□□□ -0.36
CCM2-217ENST00000492883 SNPHO15079 494 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 FADS1O60427 444 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 AGR2O95994 175 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 OR12D1P0DN82 309 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 ELAVL4P26378 380 aaKnown RBP12.77□□□□□ -0.37
CCM2-217ENST00000492883 LCN1P31025 176 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 KHKP50053 298 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 ANXA11P50995 505 aaKnown RBP12.77□□□□□ -0.37
CCM2-217ENST00000492883 SEC24CP53992 1094 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 GNGT1P63211 74 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 HSF1Q00613 529 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCM2-217ENST00000492883 GRAMD1BQ3KR37 738 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 DCST2Q5T1A1 773 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms